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Wdr95 WD40 repeat domain 95 [ Mus musculus (house mouse) ]

Gene ID: 381693, updated on 26-Sep-2022

Summary

Official Symbol
Wdr95provided by MGI
Official Full Name
WD40 repeat domain 95provided by MGI
Primary source
MGI:MGI:1923042
See related
Ensembl:ENSMUSG00000029658 AllianceGenome:MGI:1923042
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4930434E21Rik
Summary
Orthologous to human WDR49 (WD repeat domain 49). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
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Genomic context

See Wdr95 in Genome Data Viewer
Location:
5; 5 G3
Exon count:
32
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (149407874..149535359)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (149484409..149611894)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene mesenteric estrogen dependent adipogenesis Neighboring gene testis expressed 26 Neighboring gene predicted gene 15997 Neighboring gene predicted gene, 54316 Neighboring gene predicted gene, 35763 Neighboring gene heat shock 105kDa/110kDa protein 1 Neighboring gene predicted gene, 20005 Neighboring gene predicted pseudogene 5566

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC381693

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029440.3NP_083716.2  uncharacterized protein LOC381693

    Status: VALIDATED

    Source sequence(s)
    AK087389, AW122438
    Consensus CDS
    CCDS39409.1
    UniProtKB/TrEMBL
    E9PUB4, Q8BN84
    Related
    ENSMUSP00000106128.2, ENSMUST00000110502.7
    Conserved Domains (4) summary
    COG2319
    Location:12460
    WD40; WD40 repeat [General function prediction only]
    pfam00400
    Location:425460
    WD40; WD domain, G-beta repeat
    sd00039
    Location:4787
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:12301
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    149407874..149535359
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017320945.2XP_017176434.1  uncharacterized protein LOC381693 isoform X1

    Conserved Domains (4) summary
    COG2319
    Location:799939
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:450758
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:462498
    7WD40; WD40 repeat [structural motif]
    pfam13833
    Location:125178
    EF-hand_8; EF-hand domain pair