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emc extra macrochaetae [ Drosophila melanogaster (fruit fly) ]

Gene ID: 38091, updated on 28-Aug-2019

Summary

Official Symbol
emcprovided by FlyBase
Official Full Name
extra macrochaetaeprovided by FlyBase
Primary source
FLYBASE:FBgn0000575
Locus tag
Dmel_CG1007
Gene type
protein coding
RNA name
extra macrochaetae
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
0094/26; 0203/10; 0587/01; 0977/09; Ach; bHLHb28; CG1007; Dm0688; Dmel\CG1007; Emc; gov; l(3)04322; l(3)05592; l(3)61Da; l(3)j4E11; ms(3)61CD

Genomic context

See emc in Genome Data Viewer
Location:
61C9-61C9; 3-0.5 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.26 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (749400..753492)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (749400..753492)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43785 Neighboring gene hinge3 Neighboring gene transfer RNA:initiator Methionine-CAT 1-3 Neighboring gene transfer RNA:Isoleucine-TAT 1-1 Neighboring gene transfer RNA:Isoleucine-TAT 1-2

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
DNA-binding transcription factor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
RNA polymerase II transcription factor binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein heterodimerization activity IPI
Inferred from Physical Interaction
more info
PubMed 
transcription corepressor activity IDA
Inferred from Direct Assay
more info
PubMed 
transcription factor binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
R3/R4 cell differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
R7 cell differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
chaeta morphogenesis TAS
Traceable Author Statement
more info
PubMed 
chorion-containing eggshell pattern formation IMP
Inferred from Mutant Phenotype
more info
PubMed 
circadian rhythm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
compound eye cone cell differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
dorsal appendage formation IMP
Inferred from Mutant Phenotype
more info
PubMed 
dorsal closure IMP
Inferred from Mutant Phenotype
more info
PubMed 
head involution IMP
Inferred from Mutant Phenotype
more info
PubMed 
imaginal disc-derived wing morphogenesis IGI
Inferred from Genetic Interaction
more info
PubMed 
imaginal disc-derived wing morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
imaginal disc-derived wing vein morphogenesis IGI
Inferred from Genetic Interaction
more info
PubMed 
imaginal disc-derived wing vein morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
midgut development IMP
Inferred from Mutant Phenotype
more info
PubMed 
negative regulation of DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
negative regulation of DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
negative regulation of neuron differentiation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
negative regulation of transcription by RNA polymerase II TAS
Traceable Author Statement
more info
PubMed 
negative regulation of transcription, DNA-templated IDA
Inferred from Direct Assay
more info
PubMed 
neuron differentiation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
photoreceptor cell fate commitment IMP
Inferred from Mutant Phenotype
more info
PubMed 
progression of morphogenetic furrow involved in compound eye morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of cell cycle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
sex determination IGI
Inferred from Genetic Interaction
more info
PubMed 
sex determination, primary response to X:A ratio TAS
Traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
colocalizes_with cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleoplasm HDA PubMed 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
extra macrochaetae
Names
CG1007-PA
achetous
emc-PA
extra macrochaete
extra macrocheatae
extramachrochaetae
extramacrochaetae
extramacrochaete
extramacrocheatae
extramacrocheate
golovan
male sterile(3)61CD

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    749400..753492
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079152.4NP_523876.2  extra macrochaetae [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_523876.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P18491
    Related
    FBpp0072477, FBtr0072578
    Conserved Domains (1) summary
    cd00083
    Location:3780
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
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