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rpl27a.L ribosomal protein L27a L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379881, updated on 11-Apr-2024

Summary

Official Symbol
rpl27a.L
Official Full Name
ribosomal protein L27a L homeolog
Primary source
Xenbase:XB-GENE-5853953
Locus tag
XELAEV_18035356mg
See related
EnsemblRapid:ENSXLAG00005015425
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
rpl27a
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Genomic context

See rpl27a.L in Genome Data Viewer
Location:
chromosome: 7L
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7L NC_054383.1 (79294890..79300461)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7L NC_030736.1 (70714452..70720023)

Chromosome 7L - NC_054383.1Genomic Context describing neighboring genes Neighboring gene SRP receptor subunit alpha L homeolog Neighboring gene FAD-dependent oxidoreductase domain containing 1 L homeolog Neighboring gene 6-4 photolyase L homeolog Neighboring gene small nucleolar RNA SNORA3/SNORA45 family Neighboring gene small nucleolar RNA SNORA3/SNORA45 family Neighboring gene ubiquitin associated and SH3 domain containing B L homeolog Neighboring gene glucuronokinase 1 L homeolog

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Clone Names

  • MGC64291

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 
part_of large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ribosomal protein L27a L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086720.2NP_001080189.1  ribosomal protein L27a L homeolog

    See identical proteins and their annotated locations for NP_001080189.1

    Status: PROVISIONAL

    Source sequence(s)
    BC053769
    UniProtKB/TrEMBL
    A0A974CC24, Q7SZB2
    Related
    ENSXLAP00005045253.1, ENSXLAT00005046352.1
    Conserved Domains (1) summary
    PTZ00160
    Location:1148
    PTZ00160; 60S ribosomal protein L27a; Provisional

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054383.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    79294890..79300461
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)