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id3.L inhibitor of DNA binding 3, HLH protein L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379222, updated on 27-Jan-2018

Summary

Official Symbol
id3.L
Official Full Name
inhibitor of DNA binding 3, HLH protein L homeolog
Primary source
Xenbase:XB-GENE-6256366
Locus tag
XELAEV_18012086mg
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
id3; XId3; XIdI; XIdx; XIdIa; XIdIb; id3-a; id3-b; heir-1

Genomic context

See id3.L in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (57932732..57934833)

Chromosome 2L - NC_030726.1Genomic Context describing neighboring genes Neighboring gene glucocorticoid modulatory element binding protein 1 L homeolog Neighboring gene YTH N(6)-methyladenosine RNA binding protein 2 L homeolog Neighboring gene guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2-like Neighboring gene peptide methionine sulfoxide reductase MsrA 1-like Neighboring gene phosphatase and actin regulator 4 L homeolog Neighboring gene mediator complex subunit 18 L homeolog

Genomic regions, transcripts, and products

Genomic Sequence:
NC_030726.1 Chromosome 2L Reference Xenopus_laevis_v2 Primary Assembly

Bibliography

Pathways from BioSystems

  • TGF-beta signaling pathway, organism-specific biosystem (from KEGG)
    TGF-beta signaling pathway, organism-specific biosystemThe transforming growth factor-beta (TGF-beta) family members, which include TGF-betas, activins and bone morphogenetic proteins (BMPs), are structurally related secreted cytokines found in species r...
  • TGF-beta signaling pathway, conserved biosystem (from KEGG)
    TGF-beta signaling pathway, conserved biosystemThe transforming growth factor-beta (TGF-beta) family members, which include TGF-betas, activins and bone morphogenetic proteins (BMPs), are structurally related secreted cytokines found in species r...

General protein information

Preferred Names
DNA-binding protein inhibitor ID-3-A
Names
Inhibitor of differentiation 3
inhibitor of DNA binding 3, dominant negative helix-loop-helix protein L homeolog
inhibitor of differentiation 3-A

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086066.1NP_001079535.1  DNA-binding protein inhibitor ID-3-A

    See identical proteins and their annotated locations for NP_001079535.1

    Status: PROVISIONAL

    Source sequence(s)
    BC044039
    UniProtKB/Swiss-Prot
    Q91399
    UniProtKB/TrEMBL
    A0A1L8HEA2
    Conserved Domains (1) summary
    smart00353
    Location:4790
    HLH; helix loop helix domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v2 Primary Assembly

Genomic

  1. NC_030726.1 Reference Xenopus_laevis_v2 Primary Assembly

    Range
    57932732..57934833
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018244752.1XP_018100241.1  DNA-binding protein inhibitor ID-3-A isoform X1

    UniProtKB/Swiss-Prot
    Q91399
    UniProtKB/TrEMBL
    A0A1L8HEA2
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