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PSMA3-AS1 PSMA3 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 379025, updated on 25-Jan-2022

Summary

Official Symbol
PSMA3-AS1provided by HGNC
Official Full Name
PSMA3 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:26445
See related
Ensembl:ENSG00000257621 AllianceGenome:HGNC:26445
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in lymph node (RPKM 21.4), spleen (RPKM 19.8) and 25 other tissues See more
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Genomic context

See PSMA3-AS1 in Genome Data Viewer
Location:
14q23.1
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 14 NC_000014.9 (58265365..58298137, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (58732083..58764855, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene actin related protein 10 Neighboring gene tRNA-Lys (anticodon CTT) 1-1 Neighboring gene proteasome 20S subunit alpha 3 Neighboring gene HNF4 motif-containing MPRA enhancer 46 Neighboring gene high mobility group box 1 pseudogene 14 Neighboring gene long intergenic non-protein coding RNA 216 Neighboring gene RNA, U6 small nuclear 341, pseudogene Neighboring gene AT-rich interaction domain 4A Neighboring gene TOMM20L divergent transcript Neighboring gene translocase of outer mitochondrial membrane 20 like Neighboring gene translocase of inner mitochondrial membrane 9

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Clone Names

  • FLJ31306

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_029434.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) is the longer transcript.
    Source sequence(s)
    AL132989, BC034618, BU533562
    Related
    ENST00000554360.5
  2. NR_029435.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) omits an exon and represents use of an alternate splice acceptor site compared to variant 1.
    Source sequence(s)
    AL132989, BC034618, BU533562, BX460997, BX482479

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p13 Primary Assembly

    Range
    58265365..58298137 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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