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MSH2 mutS homolog 2 [ Gallus gallus (chicken) ]

Gene ID: 378799, updated on 20-Jun-2018

Summary

Symbol
MSH2provided by CGNC
Full Name
mutS homolog 2provided by CGNC
Primary source
CGNC:6808
See related
Ensembl:ENSGALG00000008962
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs

Genomic context

See MSH2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
16
Annotation release Status Assembly Chr Location
104 current GRCg6a (GCF_000002315.5) 3 NC_006090.5 (9267941..9295868)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 3 NC_006090.4 (8658336..8686257)

Chromosome 3 - NC_006090.5Genomic Context describing neighboring genes Neighboring gene tRNA methyltransferase 61B Neighboring gene speedy/RINGO cell cycle regulator family member A Neighboring gene epithelial cell adhesion molecule Neighboring gene potassium two pore domain channel subfamily K member 12 Neighboring gene uncharacterized LOC107052015

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General gene information

Homology

General protein information

Preferred Names
DNA mismatch repair protein Msh2
Names
mutS homolog 2, colon cancer, nonpolyposis type 1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCg6a Primary Assembly

Genomic

  1. NC_006090.5 Reference GRCg6a Primary Assembly

    Range
    9267941..9295868
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015278122.2XP_015133608.1  DNA mismatch repair protein Msh2

    UniProtKB/TrEMBL
    F1NV33
    Related
    ENSGALP00000014557.5
    Conserved Domains (6) summary
    cd03285
    Location:642861
    ABC_MSH2_euk; ATP-binding cassette domain of eukaryotic MutS2 homolog
    COG0249
    Location:32912
    MutS; DNA mismatch repair ATPase MutS [Replication, recombination and repair]
    pfam01624
    Location:26141
    MutS_I; MutS domain I
    pfam05188
    Location:163293
    MutS_II; MutS domain II
    pfam05190
    Location:482578
    MutS_IV; MutS family domain IV
    pfam05192
    Location:314432
    MutS_III; MutS domain III
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