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MSH2 mutS homolog 2 [ Gallus gallus (chicken) ]

Gene ID: 378799, updated on 24-Jun-2020

Summary

Symbol
MSH2provided by CGNC
Full Name
mutS homolog 2provided by CGNC
Primary source
CGNC:6808
See related
Ensembl:ENSGALG00000008962
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
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Genomic context

See MSH2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
16
Annotation release Status Assembly Chr Location
104 current GRCg6a (GCF_000002315.5) 3 NC_006090.5 (9267941..9295868)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 3 NC_006090.4 (8658336..8686257)
102 previous assembly Gallus_gallus-4.0 (GCF_000002315.3) 3 NC_006090.3 (8542291..8569967)

Chromosome 3 - NC_006090.5Genomic Context describing neighboring genes Neighboring gene tRNA methyltransferase 61B Neighboring gene speedy/RINGO cell cycle regulator family member A Neighboring gene epithelial cell adhesion molecule Neighboring gene potassium two pore domain channel subfamily K member 12 Neighboring gene uncharacterized LOC107052015

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
DNA mismatch repair protein Msh2
Names
mutS homolog 2, colon cancer, nonpolyposis type 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCg6a Primary Assembly

Genomic

  1. NC_006090.5 Reference GRCg6a Primary Assembly

    Range
    9267941..9295868
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015278122.2XP_015133608.1  DNA mismatch repair protein Msh2

    UniProtKB/TrEMBL
    F1NV33
    Related
    ENSGALP00000014557.5, ENSGALT00000014573.6
    Conserved Domains (6) summary
    cd03285
    Location:642861
    ABC_MSH2_euk; ATP-binding cassette domain of eukaryotic MutS2 homolog
    COG0249
    Location:32912
    MutS; DNA mismatch repair ATPase MutS [Replication, recombination and repair]
    pfam01624
    Location:26141
    MutS_I; MutS domain I
    pfam05188
    Location:163293
    MutS_II; MutS domain II
    pfam05190
    Location:482578
    MutS_IV; MutS family domain IV
    pfam05192
    Location:314432
    MutS_III; MutS domain III
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