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PI4KAP2 phosphatidylinositol 4-kinase alpha pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 375133, updated on 13-May-2022

Summary

Official Symbol
PI4KAP2provided by HGNC
Official Full Name
phosphatidylinositol 4-kinase alpha pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:33577
See related
Ensembl:ENSG00000183506 AllianceGenome:HGNC:33577
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to enable 1-phosphatidylinositol 4-kinase activity. Predicted to be involved in phosphatidylinositol phosphate biosynthetic process and phosphatidylinositol-mediated signaling. Predicted to be active in cytoplasm and plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in brain (RPKM 25.3), placenta (RPKM 22.7) and 25 other tissues See more
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Genomic context

See PI4KAP2 in Genome Data Viewer
Location:
22q11.21
Exon count:
17
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (21472998..21517491, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (21830884..21875364)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (21827287..21871780, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene HIC ZBTB transcriptional repressor 2 Neighboring gene transmembrane protein 191C Neighboring gene small nucleolar RNA U13 Neighboring gene small Cajal body-specific RNA 17

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • Putative phosphatidylinositol 4-kinase alpha-like protein P2
  • phosphatidylinositol 4-kinase, catalytic, alpha polypeptide pseudogene 2
  • phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 2

Clone Names

  • FLJ44912, MGC31920

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables 1-phosphatidylinositol 4-kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables phosphatidylinositol kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol phosphate biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in phosphatidylinositol-mediated signaling IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in phosphorylation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003700.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC020225, BC139841, CX751888, DA463001
    Related
    ENST00000450651.5

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    21472998..21517491 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    21830884..21875364
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)