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FAM89A family with sequence similarity 89 member A [ Homo sapiens (human) ]

Gene ID: 375061, updated on 22-Apr-2017
Official Symbol
FAM89Aprovided by HGNC
Official Full Name
family with sequence similarity 89 member Aprovided by HGNC
Primary source
HGNC:HGNC:25057
See related
Ensembl:ENSG00000182118 Vega:OTTHUMG00000037960
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C1orf153
Orthologs
Location:
1q42.2
Exon count:
2
Annotation release Status Assembly Chr Location
108 current GRCh38.p7 (GCF_000001405.33) 1 NC_000001.11 (231018958..231040249, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (231154704..231175995, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat domain 13 Neighboring gene ARV1 homolog, fatty acid homeostasis modulator Neighboring gene ring finger protein 4 pseudogene Neighboring gene microRNA 1182 Neighboring gene peptidylprolyl isomerase A like 4C pseudogene Neighboring gene tripartite motif containing 67 Neighboring gene uncharacterized LOC149373

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016

NHGRI GWAS Catalog

Description
Novel genetic variants modify the effect of smoking on carotid plaque burden in Hispanics.
NHGRI GWA Catalog

Markers

Homology

Clone Names

  • MGC15887

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_198552.2NP_940954.1  protein FAM89A

    See identical proteins and their annotated locations for NP_940954.1

    Status: VALIDATED

    Source sequence(s)
    AL732414, BC009447, CD365446
    Consensus CDS
    CCDS1590.1
    UniProtKB/Swiss-Prot
    Q96GI7
    Related
    ENSP00000355614.4, OTTHUMP00000036071, ENST00000366654.4, OTTHUMT00000092652

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p7 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p7 Primary Assembly

    Range
    231018958..231040249 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CHM1_1.1

Genomic

  1. NC_018912.2 Alternate CHM1_1.1

    Range
    232428406..232449694 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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