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ZSWIM9 zinc finger SWIM-type containing 9 [ Homo sapiens (human) ]

Gene ID: 374920, updated on 13-Mar-2020

Summary

Official Symbol
ZSWIM9provided by HGNC
Official Full Name
zinc finger SWIM-type containing 9provided by HGNC
Primary source
HGNC:HGNC:34495
See related
Ensembl:ENSG00000185453
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C19orf68
Expression
Ubiquitous expression in brain (RPKM 3.0), fat (RPKM 2.3) and 25 other tissues See more
Orthologs

Genomic context

See ZSWIM9 in Genome Data Viewer
Location:
19q13.33
Exon count:
6
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (48170662..48197621)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (48673952..48700879)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene phospholipase A2 group IVC Neighboring gene PLA2G4C antisense RNA 1 Neighboring gene DNA ligase 1 Neighboring gene uncharacterized LOC107985293 Neighboring gene caspase recruitment domain family member 8 Neighboring gene CARD8 antisense RNA 1 Neighboring gene vomeronasal 1 receptor 97 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC50339

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
uncharacterized protein ZSWIM9
Names
uncharacterized protein C19orf68

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199341.4NP_955373.3  uncharacterized protein ZSWIM9

    See identical proteins and their annotated locations for NP_955373.3

    Status: VALIDATED

    Source sequence(s)
    AC011466, BC043386
    Consensus CDS
    CCDS74411.1
    UniProtKB/Swiss-Prot
    Q86XI8
    Related
    ENSP00000480314.1, ENST00000614654.2
    Conserved Domains (1) summary
    pfam03101
    Location:97128
    FAR1; FAR1 DNA-binding domain

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    48170662..48197621
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006723205.2XP_006723268.1  uncharacterized protein ZSWIM9 isoform X3

    See identical proteins and their annotated locations for XP_006723268.1

    Conserved Domains (1) summary
    pfam03101
    Location:97128
    FAR1; FAR1 DNA-binding domain
  2. XM_006723204.3XP_006723267.1  uncharacterized protein ZSWIM9 isoform X1

    Conserved Domains (1) summary
    pfam03101
    Location:124155
    FAR1; FAR1 DNA-binding domain
  3. XM_005259449.3XP_005259506.1  uncharacterized protein ZSWIM9 isoform X2

    Conserved Domains (1) summary
    pfam03101
    Location:110141
    FAR1; FAR1 DNA-binding domain
  4. XM_011526936.2XP_011525238.1  uncharacterized protein ZSWIM9 isoform X4

    Conserved Domains (1) summary
    pfam03101
    Location:956
    FAR1; FAR1 DNA-binding domain
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