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SPEM1 spermatid maturation 1 [ Homo sapiens (human) ]

Gene ID: 374768, updated on 23-Nov-2021

Summary

Official Symbol
SPEM1provided by HGNC
Official Full Name
spermatid maturation 1provided by HGNC
Primary source
HGNC:HGNC:32429
See related
Ensembl:ENSG00000181323 MIM:615116
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C17orf83
Expression
Restricted expression toward testis (RPKM 24.6) See more
Orthologs
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Genomic context

See SPEM1 in Genome Data Viewer
Location:
17p13.1
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (7420324..7421632)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (7323643..7324951)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene TMEM256-PLSCR3 readthrough (NMD candidate) Neighboring gene transmembrane protein 256 Neighboring gene neuroligin 2 Neighboring gene SPEM family member 2 Neighboring gene SPEM family member 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Potential readthrough

Included gene: FGF11

Homology

Clone Names

  • FLJ40081

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in flagellated sperm motility IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in sperm individualization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
spermatid maturation protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199339.3NP_955371.2  spermatid maturation protein 1

    See identical proteins and their annotated locations for NP_955371.2

    Status: VALIDATED

    Source sequence(s)
    AC113189, BC033882
    Consensus CDS
    CCDS42254.1
    UniProtKB/Swiss-Prot
    Q8N4L4
    Related
    ENSP00000315554.3, ENST00000323675.4
    Conserved Domains (1) summary
    pfam15670
    Location:46147
    Spem1; Spermatid maturation protein 1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    7420324..7421632
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_016107299.1 Reference GRCh38.p13 PATCHES

    Range
    40781..42089
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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