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LINC02716 long intergenic non-protein coding RNA 2716 [ Homo sapiens (human) ]

Gene ID: 374387, updated on 13-May-2022

Summary

Official Symbol
LINC02716provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2716provided by HGNC
Primary source
HGNC:HGNC:25454
See related
AllianceGenome:HGNC:25454
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
DKFZp779M0652
Expression
Biased expression in fat (RPKM 1.5), liver (RPKM 0.9) and 12 other tissues See more
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Genomic context

See LINC02716 in Genome Data Viewer
Location:
11p11.2
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (45771432..45772358)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (45927409..45928335)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (45792983..45793909)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902667 Neighboring gene long intergenic non-protein coding RNA 2690 Neighboring gene solute carrier family 35 member C1 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr11:45882374-45883573 Neighboring gene cryptochrome circadian regulator 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027134.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    BC126374, BX640618

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    45771432..45772358
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    45927409..45928335
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_199137.1: Suppressed sequence

    Description
    NM_199137.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.