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vax1.S ventral anterior homeobox 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 373698, updated on 18-Sep-2024

Summary

Official Symbol
vax1.S
Official Full Name
ventral anterior homeobox 1 S homeolog
Primary source
Xenbase:XB-GENE-6252856
Locus tag
XELAEV_18036658mg
See related
EnsemblRapid:ENSXLAG00005020560
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
vax; vax1; vax1b; xvax1; vax1-a; vax1-b; xvax1b; vax1b-a
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Genomic context

See vax1.S in Genome Data Viewer
Location:
chromosome: 7S
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (2749063..2756413)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (2781605..2788955)

Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene inactive pancreatic lipase-related protein 1 Neighboring gene pancreatic lipase-related protein 1 S homeolog Neighboring gene heat shock protein family A (Hsp70) member 12A S homeolog Neighboring gene synaptic vesicular amine transporter

Genomic regions, transcripts, and products

General protein information

Preferred Names
ventral anterior homeobox 1a
Names
homeobox protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001085680.1NP_001079149.1  ventral anterior homeobox 1a

    See identical proteins and their annotated locations for NP_001079149.1

    Status: PROVISIONAL

    Source sequence(s)
    AF064601
    UniProtKB/Swiss-Prot
    O93528
    UniProtKB/TrEMBL
    A0A974CAK9
    Related
    ENSXLAP00005060251.1, ENSXLAT00005061700.1
    Conserved Domains (1) summary
    pfam00046
    Location:100153
    Homeobox; Homeobox domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    2749063..2756413
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)