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NP_RS11910 bacteriorhodopsin [ Natronomonas pharaonis DSM 2160 ]

Gene ID: 3703211, updated on 3-Dec-2025
Gene symbol
NP_RS11910
Gene description
bacteriorhodopsin
Locus tag
NP_RS11910
Gene type
protein coding
Organism
Natronomonas pharaonis DSM 2160 (strain: Gabara, culture-collection: DSM:2160, type-material: type strain of Halobacterium pharaonis)
Lineage
Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Halobacteria; Halobacteriales; Natronomonadaceae; Natronomonas
Old locus tag
NP4834A; NP_4834A
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Sequence:
NC_007426.1 (2360092..2360811)

NC_007426.1Genomic Context describing neighboring genes Neighboring gene glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit Neighboring gene sensory rhodopsin II transducer Neighboring gene hydroxymethylglutaryl-CoA synthase Neighboring gene hypothetical protein

Genomic Sequence:
NC_007426.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Comparative simulations of the ground state and the M-intermediate state of the sensory rhodopsin II-transducer complex with a HAMP domain model. Nishikata K, et al. Biochemistry, 2012 Jul 31. PMID 22757657
  2. Active state of sensory rhodopsin II: structural determinants for signal transfer and proton pumping. Gushchin I, et al. J Mol Biol, 2011 Sep 30. PMID 21840321
  3. Structure determination of the seven-helix transmembrane receptor sensory rhodopsin II by solution NMR spectroscopy. Gautier A, et al. Nat Struct Mol Biol, 2010 Jun. PMID 20512150, Free PMC Article
  4. Structural changes in the O-decay accelerated mutants of pharaonis phoborhodopsin. Sudo Y, et al. Biochemistry, 2008 Mar 4. PMID 18247579
  5. Structural analysis of a HAMP domain: the linker region of the phototransducer in complex with sensory rhodopsin II. Bordignon E, et al. J Biol Chem, 2005 Nov 18. PMID 16157581

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Significant structural differences are observed in sensory rhodopsin II between the ground state and the M-intermediate state.
    Title: Comparative simulations of the ground state and the M-intermediate state of the sensory rhodopsin II-transducer complex with a HAMP domain model.
  2. Crystal structure of the active state of uncomplexed sensory rhodopsin II
    Title: Active state of sensory rhodopsin II: structural determinants for signal transfer and proton pumping.
  3. first NMR structure determination of a detergent-solubilized seven-helix transmembrane (7TM) protein, the phototaxis receptor sensory rhodopsin II (pSRII)
    Title: Structure determination of the seven-helix transmembrane receptor sensory rhodopsin II by solution NMR spectroscopy.
  4. Results conclude that the lifetime of the O intermediate in phoborhodopsin ( ppR, also called pharaonis sensory rhodopsin II, psRII) is regulated by the distorted alpha-helix and strengthened hydrogen bond of Cys204.
    Title: Structural changes in the O-decay accelerated mutants of pharaonis phoborhodopsin.
  5. analysis of the linker region of the phototransducer in complex with sensory rhodopsin II
    Title: Structural analysis of a HAMP domain: the linker region of the phototransducer in complex with sensory rhodopsin II.
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Homology

Preferred Names
bacteriorhodopsin

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007426.1 Reference assembly

    Range
    2360092..2360811
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011324120.1 bacteriorhodopsin

    See identical proteins and their annotated locations for WP_011324120.1

    UniProtKB/Swiss-Prot
    P42196
    UniProtKB/TrEMBL
    A0A1U7EZ03
    Conserved Domains (1) summary
    cd15029
    Location:3 → 216
    7tm_SRI_SRII; light-sensor activating transmembrane transducer protein sensory rhodopsin I and II; member of the seven-transmembrane GPCR superfamily
Nucleotide Protein
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