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skap2 src kinase associated phosphoprotein 2 [ Danio rerio (zebrafish) ]

Gene ID: 368564, updated on 25-Aug-2020

Summary

Official Symbol
skap2provided by ZNC
Official Full Name
src kinase associated phosphoprotein 2provided by ZNC
Primary source
ZFIN:ZDB-GENE-030616-438
See related
Ensembl:ENSDARG00000000906
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
sc; scap2; SKAP55; zgc:65975; zgc:158223; si:dz31b14.4; si:dz227h09.6
Orthologs

Genomic context

See skap2 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
13
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (20934358..20977712)
105 previous assembly GRCz10 (GCF_000002035.5) 16 NC_007127.6 (21128539..21171890)
103 previous assembly Zv9 (GCF_000002035.4) 16 NC_007127.5 (23018418..23062139)

Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101886298 Neighboring gene homeobox A9b Neighboring gene homeobox A2b Neighboring gene sorting nexin 10b Neighboring gene chromobox homolog 3b

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Homology

Clone Names

  • MGC65975

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
kinase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
B cell activation IEA
Inferred from Electronic Annotation
more info
 
phosphorylation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
src kinase-associated phosphoprotein 2
Names
SKAP55 homolog
src family-associated phosphoprotein 2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_200628.1NP_956922.1  src kinase-associated phosphoprotein 2

    See identical proteins and their annotated locations for NP_956922.1

    Status: PROVISIONAL

    Source sequence(s)
    BC057253
    UniProtKB/Swiss-Prot
    Q6PG29
    Related
    ENSDARP00000052659.5, ENSDART00000052660.7
    Conserved Domains (3) summary
    cd12045
    Location:283335
    SH3_SKAP2; Src Homology 3 domain of Src Kinase-Associated Phosphoprotein 2
    cd13381
    Location:106211
    PH_Skap-hom_Skap2; Src kinase-associated phosphoprotein homolog and Skap 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:106208
    PH; PH domain

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007127.7 Reference GRCz11 Primary Assembly

    Range
    20934358..20977712
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005157963.4XP_005158020.1  src kinase-associated phosphoprotein 2 isoform X1

    Conserved Domains (3) summary
    cd12045
    Location:282334
    SH3_SKAP2; Src Homology 3 domain of Src Kinase-Associated Phosphoprotein 2
    cd13381
    Location:106211
    PH_Skap-hom_Skap2; Src kinase-associated phosphoprotein homolog and Skap 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:106208
    PH; PH domain
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