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dlst dihydrolipoamide S-succinyltransferase [ Danio rerio (zebrafish) ]

Gene ID: 368262, updated on 17-Nov-2020

Summary

Official Symbol
dlstprovided by ZNC
Official Full Name
dihydrolipoamide S-succinyltransferaseprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030326-1
See related
Ensembl:ENSDARG00000014230
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
cb60; wu:fc39d01
Orthologs

Genomic context

See dlst in Genome Data Viewer
Location:
chromosome: 17
Exon count:
15
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (52524452..52553442)
105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (52438152..52467142)
103 previous assembly Zv9 (GCF_000002035.4) 17 NC_007128.5 (53052585..53081575)

Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene estrogen-related receptor beta Neighboring gene prospero homeobox 2 Neighboring gene si:ch211-173a9.6 Neighboring gene ribosomal protein S6 kinase-like 1

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
dihydrolipoyllysine-residue succinyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity, transferring acyl groups IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
ATP biosynthetic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
L-lysine catabolic process to acetyl-CoA via saccharopine IEA
Inferred from Electronic Annotation
more info
 
heart contraction IMP
Inferred from Mutant Phenotype
more info
PubMed 
hemopoiesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
mitochondrion morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
oxoglutarate dehydrogenase complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial
Names
schneckentempo
NP_958895.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_201487.1NP_958895.1  dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial

    See identical proteins and their annotated locations for NP_958895.1

    Status: PROVISIONAL

    Source sequence(s)
    BC045500
    UniProtKB/TrEMBL
    Q7ZVL3
    Related
    ENSDARP00000006973.6, ENSDART00000016614.7
    Conserved Domains (3) summary
    cd06849
    Location:71143
    lipoyl_domain; Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid dehydrogenase multienzyme complexes, like pyruvate dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH) and branched-chain 2-oxo acid ...
    TIGR01347
    Location:71457
    sucB; 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component)
    pfam00198
    Location:243456
    2-oxoacid_dh; 2-oxoacid dehydrogenases acyltransferase (catalytic domain)

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007128.7 Reference GRCz11 Primary Assembly

    Range
    52524452..52553442
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395000.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    113972..140931
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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