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Garin2 golgi associated RAB2 interactor family member 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 366671, updated on 30-May-2026
Official Symbol
Garin2provided by RGD
Official Full Name
golgi associated RAB2 interactor family member 2provided by RGD
Primary source
RGD:1564393
See related
Ensembl:ENSRNOG00000028351 AllianceGenome:RGD:1564393
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Fam71d
Summary
Predicted to act upstream of or within several processes, including flagellated sperm motility; penetration of zona pellucida; and spermatid development. Predicted to be located in sperm midpiece. Predicted to be active in sperm head. Orthologous to human GARIN2 (golgi associated RAB2 interactor family member 2). [provided by Alliance of Genome Resources, Jul 2025]
Expression
Restricted expression toward (RPKM 317.0) See more
Orthologs
all
Try the new Gene page
Try the new Transcripts and proteins table
See Garin2 in Genome Data Viewer
Location:
6q24
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (103223142..103267822)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (97489562..97534729)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (101864567..101910312)

Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase RNF138-like Neighboring gene gephyrin Neighboring gene ephrin type-A receptor 7-like Neighboring gene chromobox 1, pseudogene 2 Neighboring gene uncharacterized LOC100909680 Neighboring gene U6 snRNA-associated Sm-like protein LSm8 pseudogene Neighboring gene protein associated with LIN7 1, MAGUK p55 family member Neighboring gene ATPase H+ transporting V1 subunit D

Go to nucleotide: Graphics FASTA GenBank

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RGD

Process Evidence Code Pubs
acts_upstream_of_or_within cell morphogenesis ISO
Inferred from Sequence Orthology
more info
  
acts_upstream_of_or_within flagellated sperm motility ISO
Inferred from Sequence Orthology
more info
  
involved_in flagellated sperm motility ISO
Inferred from Sequence Orthology
more info
  
acts_upstream_of_or_within penetration of zona pellucida ISO
Inferred from Sequence Orthology
more info
  
involved_in spermatid development IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within spermatid development ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in sperm head ISO
Inferred from Sequence Orthology
more info
  
located_in sperm midpiece ISO
Inferred from Sequence Orthology
more info
  
Preferred Names
Golgi-associated RAB2 interactor protein 2
Names
family with sequence similarity 71, member D

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017469.2 → NP_001017469.2  Golgi-associated RAB2 interactor protein 2 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000006
    UniProtKB/TrEMBL
    Q6AYN1
    Related
    ENSRNOP00000030883.2, ENSRNOT00000029888.4

  2. NM_001434046.1 → NP_001420975.1  Golgi-associated RAB2 interactor protein 2 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000006
    UniProtKB/TrEMBL
    A6HCE4

  3. NM_001434048.1 → NP_001420977.1  Golgi-associated RAB2 interactor protein 2 isoform 3

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000006
    UniProtKB/TrEMBL
    A6HCE0

  4. NM_001434049.1 → NP_001420978.1  Golgi-associated RAB2 interactor protein 2 isoform 4

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000006
    UniProtKB/TrEMBL
    A6HCE0

  5. NM_001434050.1 → NP_001420979.1  Golgi-associated RAB2 interactor protein 2 isoform 4

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000006
    UniProtKB/TrEMBL
    A6HCE0

  6. NM_001434051.1 → NP_001420980.1  Golgi-associated RAB2 interactor protein 2 isoform 4

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000006
    UniProtKB/TrEMBL
    A6HCE0

  7. NM_001434056.1 → NP_001420985.1  Golgi-associated RAB2 interactor protein 2 isoform 5

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000006
    UniProtKB/TrEMBL
    A6HCE0

  8. NM_001434059.1 → NP_001420988.1  Golgi-associated RAB2 interactor protein 2 isoform 5

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000006
    UniProtKB/TrEMBL
    A6HCE0

  9. NM_001434060.1 → NP_001420989.1  Golgi-associated RAB2 interactor protein 2 isoform 6

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000006
    UniProtKB/TrEMBL
    A6HCE0

  10. NM_001434061.1 → NP_001420990.1  Golgi-associated RAB2 interactor protein 2 isoform 7

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000006
    UniProtKB/TrEMBL
    A6HCE4

  11. NM_001434062.1 → NP_001420991.1  Golgi-associated RAB2 interactor protein 2 isoform 8

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000006
    UniProtKB/TrEMBL
    A6HCE4

  12. NM_001434063.1 → NP_001420992.1  Golgi-associated RAB2 interactor protein 2 isoform 8

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000006
    UniProtKB/TrEMBL
    A6HCE4

  13. NM_001434064.1 → NP_001420993.1  Golgi-associated RAB2 interactor protein 2 isoform 8

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000006
    UniProtKB/TrEMBL
    A6HCE4

  14. NM_001434065.1 → NP_001420994.1  Golgi-associated RAB2 interactor protein 2 isoform 8

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000006
    UniProtKB/TrEMBL
    A6HCE4

  15. NM_001434066.1 → NP_001420995.1  Golgi-associated RAB2 interactor protein 2 isoform 8

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000006
    UniProtKB/TrEMBL
    A6HCE4

  16. NM_001434067.1 → NP_001420996.1  Golgi-associated RAB2 interactor protein 2 isoform 9

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000006

  17. NM_001434068.1 → NP_001420997.1  Golgi-associated RAB2 interactor protein 2 isoform 10

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000006

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086024.1 Reference GRCr8

    Range
    103223142..103267822
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017594259.3 → XP_017449748.1  

    Conserved Domains (1) summary
    pfam12480
    Location:116 → 186
    DUF3699; Protein of unknown function (DUF3699)

  2. XM_063262204.1 → XP_063118274.1  

  3. XM_063262212.1 → XP_063118282.1  

  4. XM_017594255.3 → XP_017449744.1  

    Related
    ENSRNOP00000088945.2, ENSRNOT00000098828.2

  5. XM_063262205.1 → XP_063118275.1  Golgi-associated RAB2 interactor protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A8I5ZVQ0, A6HCE0

  6. XM_063262214.1 → XP_063118284.1  Golgi-associated RAB2 interactor protein 2 isoform X7

    UniProtKB/TrEMBL
    A0ABK0LWT3, A6HCE1, A6HCE4

  7. XM_063262206.1 → XP_063118276.1  Golgi-associated RAB2 interactor protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A8I5ZVQ0, A6HCE0

  8. XM_063262213.1 → XP_063118283.1  

  9. XM_063262208.1 → XP_063118278.1  Golgi-associated RAB2 interactor protein 2 isoform X5

    UniProtKB/TrEMBL
    A6HCE0

  10. XM_017594257.3 → XP_017449746.1  

  11. XM_017594254.3 → XP_017449743.1  

    Related
    ENSRNOP00000111374.1, ENSRNOT00000161205.1

  12. XM_063262195.1 → XP_063118265.1  Golgi-associated RAB2 interactor protein 2 isoform X2

    UniProtKB/TrEMBL
    A0ABK0LKF7, A6HCE4

  13. XM_063262199.1 → XP_063118269.1  

    Related
    ENSRNOP00000112689.1, ENSRNOT00000149699.1

  14. XM_063262211.1 → XP_063118281.1  

  15. XM_039112639.2 → XP_038968567.1  

    Conserved Domains (1) summary
    pfam12480
    Location:116 → 186
    DUF3699; Protein of unknown function (DUF3699)

  16. XM_017594258.3 → XP_017449747.1  Golgi-associated RAB2 interactor protein 2 isoform X6

    UniProtKB/TrEMBL
    A6HCE4
    Related
    ENSRNOP00000103730.1, ENSRNOT00000172084.1

  17. XM_063262201.1 → XP_063118271.1  

  18. XM_063262189.1 → XP_063118259.1  Golgi-associated RAB2 interactor protein 2 isoform X1

    UniProtKB/TrEMBL
    A0ABK0M2L1, A6HCE0
    Related
    ENSRNOP00000107809.1, ENSRNOT00000169901.1

  19. XM_017594253.3 → XP_017449742.1  

  20. XM_063262218.1 → XP_063118288.1  

  21. XM_063262221.1 → XP_063118291.1  

  22. XM_063262191.1 → XP_063118261.1  Golgi-associated RAB2 interactor protein 2 isoform X1

    UniProtKB/TrEMBL
    A0ABK0M2L1, A6HCE0

  23. XM_063262190.1 → XP_063118260.1  Golgi-associated RAB2 interactor protein 2 isoform X1

    UniProtKB/TrEMBL
    A0ABK0M2L1, A6HCE0

  24. XM_063262219.1 → XP_063118289.1  Golgi-associated RAB2 interactor protein 2 isoform X8

  25. XM_063262220.1 → XP_063118290.1  Golgi-associated RAB2 interactor protein 2 isoform X9

  26. XM_063262207.1 → XP_063118277.1  Golgi-associated RAB2 interactor protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A8I5ZVQ0, A6HCE0

  27. XM_063262187.1 → XP_063118257.1  Golgi-associated RAB2 interactor protein 2 isoform X2

    UniProtKB/TrEMBL
    A0ABK0LKF7, A6HCE4

  28. XM_063262200.1 → XP_063118270.1  Golgi-associated RAB2 interactor protein 2 isoform X3

    UniProtKB/TrEMBL
    A0ABK0M8T2, A6HCE0, A6HCE2

  29. XM_063262192.1 → XP_063118262.1  Golgi-associated RAB2 interactor protein 2 isoform X1

    UniProtKB/TrEMBL
    A0ABK0M2L1, A6HCE0

  30. XM_063262186.1 → XP_063118256.1  Golgi-associated RAB2 interactor protein 2 isoform X1

    UniProtKB/TrEMBL
    A0ABK0M2L1, A6HCE0

  31. XM_063262193.1 → XP_063118263.1  Golgi-associated RAB2 interactor protein 2 isoform X1

    UniProtKB/TrEMBL
    A0ABK0M2L1, A6HCE0

  32. XM_063262215.1 → XP_063118285.1  Golgi-associated RAB2 interactor protein 2 isoform X7

    UniProtKB/TrEMBL
    A0ABK0LWT3, A6HCE1, A6HCE4
    Related
    ENSRNOP00000110801.1, ENSRNOT00000171111.1

  33. XM_063262202.1 → XP_063118272.1  Golgi-associated RAB2 interactor protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A8I5ZVQ0, A6HCE0
    Related
    ENSRNOP00000083630.1, ENSRNOT00000116129.2

  34. XM_063262209.1 → XP_063118279.1  

  35. XM_063262216.1 → XP_063118286.1  Golgi-associated RAB2 interactor protein 2 isoform X7

    UniProtKB/TrEMBL
    A0ABK0LWT3, A6HCE1, A6HCE4

  36. XM_063262197.1 → XP_063118267.1  Golgi-associated RAB2 interactor protein 2 isoform X3

    UniProtKB/TrEMBL
    A0ABK0M8T2, A6HCE0, A6HCE2

  37. XM_063262196.1 → XP_063118266.1  Golgi-associated RAB2 interactor protein 2 isoform X1

    UniProtKB/TrEMBL
    A0ABK0M2L1, A6HCE0

  38. XM_063262194.1 → XP_063118264.1  Golgi-associated RAB2 interactor protein 2 isoform X1

    UniProtKB/TrEMBL
    A0ABK0M2L1, A6HCE0

  39. XM_063262198.1 → XP_063118268.1  Golgi-associated RAB2 interactor protein 2 isoform X3

    UniProtKB/TrEMBL
    A0ABK0M8T2, A6HCE0, A6HCE2

  40. XM_063262188.1 → XP_063118258.1  Golgi-associated RAB2 interactor protein 2 isoform X1

    UniProtKB/TrEMBL
    A0ABK0M2L1, A6HCE0

  41. XM_063262203.1 → XP_063118273.1  Golgi-associated RAB2 interactor protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A8I5ZVQ0, A6HCE0

  42. XM_063262217.1 → XP_063118287.1  Golgi-associated RAB2 interactor protein 2 isoform X7

    UniProtKB/TrEMBL
    A0ABK0LWT3, A6HCE1, A6HCE4

  43. XM_063262210.1 → XP_063118280.1  

  44. XM_063262222.1 → XP_063118292.1  Golgi-associated RAB2 interactor protein 2 isoform X11

Nucleotide Protein Strain
Heading Accession and Version

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