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CAALFM_C106800WA decapping nuclease [ Candida albicans SC5314 ]

Gene ID: 3639496, updated on 27-Feb-2025
Gene symbol
CAALFM_C106800WA
Gene description
decapping nuclease
Locus tag
CAALFM_C106800WA
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Candida albicans SC5314 (strain: SC5314, nat-host: Homo sapiens, culture-collection: ATCC:MYA-2876)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
Orthologs
all
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Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_032089.1 (1450584..1451759)

Chromosome 1 - NC_032089.1Genomic Context describing neighboring genes Neighboring gene serine/threonine protein kinase Neighboring gene mitochondrial 54S ribosomal protein YmL19 Neighboring gene catalase A Neighboring gene uncharacterized protein

Genomic Sequence:
NC_032089.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure. Muzzey D, et al. Genome Biol, 2013. PMID 24025428, Free PMC Article
  2. Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes. van het Hoog M, et al. Genome Biol, 2007. PMID 17419877, Free PMC Article
  3. The diploid genome sequence of Candida albicans. Jones T, et al. Proc Natl Acad Sci U S A, 2004 May 11. PMID 15123810, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 5'-diphosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in NAD-cap decapping IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear-transcribed mRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
decapping nuclease
XP_718819.2
  • Ortholog(s) have GDP binding, RNA pyrophosphohydrolase activity, enzyme regulator activity, phosphodiesterase decapping endonuclease activity

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_032089.1 Reference assembly

    Range
    1450584..1451759
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_713726.2 → XP_718819.2  decapping nuclease [Candida albicans SC5314]

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A0A1D8PDX0, Q5AAT0
    UniProtKB/TrEMBL
    A0AB34Q1E9, C4YDY4
    Conserved Domains (1) summary
    pfam08652
    Location:224 → 292
    RAI1; RAI1 like PD-(D/E)XK nuclease
Nucleotide Protein
Heading Accession and Version

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