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RpS11 Ribosomal protein S11 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36321, updated on 10-Jan-2019

Summary

Official Symbol
RpS11provided by FlyBase
Official Full Name
Ribosomal protein S11provided by FlyBase
Primary source
FLYBASE:FBgn0033699
Locus tag
Dmel_CG8857
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster (old-lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-EST:fe1D2; anon-MMS23; CG8857; clone 23; Dmel\CG8857; M(2)48E; RPS11; S11

Genomic context

See RpS11 in Genome Data Viewer
Location:
48E8-48E9; 2-66 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.18 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (12199024..12200815, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (8086529..8088320, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Cyp6g1 Neighboring gene Cyp6g2 Neighboring gene Cyp6t3 Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Scavenger receptor class C, type II

Genomic regions, transcripts, and products

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the RpS11 gene: The RpS11 gene is conserved in human, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.
  • Orthologs

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
structural constituent of ribosome TAS
Traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
cytoplasmic translation TAS
Traceable Author Statement
more info
PubMed 
translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytosolic small ribosomal subunit TAS
Traceable Author Statement
more info
PubMed 
colocalizes_with nuclear chromosome IDA
Inferred from Direct Assay
more info
PubMed 
nucleolus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
ribosomal protein S11
Names
CG8857-PB
CG8857-PC
RpS11-PB
RpS11-PC
anon-fast-evolving-1D2

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    12199024..12200815 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_165868.2NP_725114.1  ribosomal protein S11, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_725114.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0E9B6
    UniProtKB/TrEMBL
    A0A1B2AJL4
    Related
    FBpp0087115, FBtr0088007
    Conserved Domains (3) summary
    PTZ00241
    Location:1155
    PTZ00241; 40S ribosomal protein S11; Provisional
    pfam00366
    Location:72141
    Ribosomal_S17; Ribosomal protein S17
    pfam16205
    Location:470
    Ribosomal_S17_N; Ribosomal_S17 N-terminal
  2. NM_165869.3NP_725115.1  ribosomal protein S11, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_725115.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1Z8U9
    Related
    FBpp0087114, FBtr0088006
    Conserved Domains (3) summary
    PTZ00241
    Location:1154
    PTZ00241; 40S ribosomal protein S11; Provisional
    pfam00366
    Location:71140
    Ribosomal_S17; Ribosomal protein S17
    pfam16205
    Location:569
    Ribosomal_S17_N; Ribosomal_S17 N-terminal
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