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rho-7 rhomboid-7 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36281, updated on 9-May-2019

Summary

Official Symbol
rho-7provided by FlyBase
Official Full Name
rhomboid-7provided by FlyBase
Primary source
FLYBASE:FBgn0033672
Locus tag
Dmel_CG8972
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-WO0138581.3; CG8972; Dmel\CG8972; PARL; R7; Rho-7; Rhomboid-7

Genomic context

See rho-7 in Genome Data Viewer
Location:
48D5-48D5; 2-65 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.26 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (11986513..11988787, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (7874018..7876292, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene beta1,3-galactosyltransferase 1 Neighboring gene Ribonucleoside diphosphate reductase small subunit Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45319 Neighboring gene long non-coding RNA:CR45318

Genomic regions, transcripts, and products

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
endopeptidase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
serine-type endopeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
mitochondrial fusion IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein processing IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of mitochondrion organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
mitochondrial inner membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
rhomboid-7
Names
CG8972-PA
CG8972-PB
Rhomboid-7
rho-7-PA
rho-7-PB
NP_001286324.1
NP_523704.1

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    11986513..11988787 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001299395.1NP_001286324.1  rhomboid-7, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286324.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1Z8R8
    Related
    FBpp0308636, FBtr0339555
    Conserved Domains (1) summary
    pfam01694
    Location:186327
    Rhomboid; Rhomboid family
  2. NM_078980.4NP_523704.1  rhomboid-7, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_523704.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1Z8R8
    Related
    FBpp0087151, FBtr0088045
    Conserved Domains (1) summary
    pfam01694
    Location:186327
    Rhomboid; Rhomboid family
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