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Gimd1 GIMAP family P-loop NTPase domain containing 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 362042, updated on 5-Sep-2025
Official Symbol
Gimd1provided by RGD
Official Full Name
GIMAP family P-loop NTPase domain containing 1provided by RGD
Primary source
RGD:1563706
See related
Ensembl:ENSRNOG00000042721 AllianceGenome:RGD:1563706
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable GTP binding activity. Orthologous to human GIMD1 (GIMAP family P-loop NTPase domain containing 1). [provided by Alliance of Genome Resources, Apr 2025]
Expression
Biased expression in Testes (RPKM 22.7), Liver (RPKM 16.9) and 1 other tissue See more
Orthologs
human mouse all
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Location:
2q43
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (223777876..223812582)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (221103878..221138559)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (237679672..237714434)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 482 Neighboring gene uncharacterized LOC134485767 Neighboring gene uncharacterized LOC102547683 Neighboring gene aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 Neighboring gene TBC1 domain containing kinase Neighboring gene small nucleolar RNA SNORA17

Go to nucleotide: Graphics FASTA GenBank

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
Preferred Names
GTPase IMAP family member GIMD1
Names
GIMAP family P-loop NTPase domain-containing protein 1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001113782.2 → NP_001107254.2  GTPase IMAP family member GIMD1

    See identical proteins and their annotated locations for NP_001107254.2

    Status: VALIDATED

    Source sequence(s)
    BC158622, JAXUCZ010000002
    UniProtKB/Swiss-Prot
    B0BMZ3
    UniProtKB/TrEMBL
    A0A8L2QUX3
    Related
    ENSRNOP00000060170.2, ENSRNOT00000064628.3
    Conserved Domains (1) summary
    cl38936
    Location:9 → 175
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    223777876..223812582
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063282220.1 → XP_063138290.1  GTPase IMAP family member GIMD1 isoform X1

    UniProtKB/Swiss-Prot
    B0BMZ3
    UniProtKB/TrEMBL
    A0A8L2QUX3

  2. XM_039102722.2 → XP_038958650.1  GTPase IMAP family member GIMD1 isoform X1

    UniProtKB/Swiss-Prot
    B0BMZ3
    UniProtKB/TrEMBL
    A0A8L2QUX3
    Conserved Domains (1) summary
    cl38936
    Location:9 → 175
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B0BMZ3.1 GenPept UniProtKB/Swiss-Prot:B0BMZ3

Gene LinkOut

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