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C19h16orf74 similar to human chromosome 16 open reading frame 74 [ Rattus norvegicus (Norway rat) ]

Gene ID: 361424, updated on 13-Apr-2024

Summary

Official Symbol
C19h16orf74provided by RGD
Official Full Name
similar to human chromosome 16 open reading frame 74provided by RGD
Primary source
RGD:1309651
See related
Ensembl:ENSRNOG00000017646 AllianceGenome:RGD:1309651
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1309651
Summary
Orthologous to human C16orf74 (chromosome 16 open reading frame 74). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Testes (RPKM 50.9), Adrenal (RPKM 21.2) and 9 other tissues See more
Orthologs
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Genomic context

Location:
19q12
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 19 NC_086037.1 (65568997..65594994, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 19 NC_051354.1 (48660288..48686287, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 19 NC_005118.4 (54184554..54210872, complement)

Chromosome 19 - NC_086037.1Genomic Context describing neighboring genes Neighboring gene Gse1 coiled-coil protein Neighboring gene 5S ribosomal RNA Neighboring gene GINS complex subunit 2 Neighboring gene cytochrome c oxidase subunit 4i1 Neighboring gene ER membrane protein complex subunit 8

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
uncharacterized protein C16orf74 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001400990.1NP_001387919.1  uncharacterized protein C16orf74 homolog

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000019
    UniProtKB/TrEMBL
    D3ZSX5
    Related
    ENSRNOP00000023721.6, ENSRNOT00000023721.7

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086037.1 Reference GRCr8

    Range
    65568997..65594994 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063278148.1XP_063134218.1  uncharacterized protein C16orf74 homolog isoform X1