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T04A8.7 1,4-alpha-glucan branching enzyme [ Caenorhabditis elegans ]

Gene ID: 3565201, updated on 22-Aug-2021

Summary

Gene symbol
T04A8.7
Gene description
1,4-alpha-glucan branching enzyme
Primary source
WormBase:WBGene00011409
Locus tag
CELE_T04A8.7
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

See T04A8.7 in Genome Data Viewer
Location:
chromosome: III
Exon count:
6
Sequence:
Chromosome: III; NC_003281.10 (4695357..4698014)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Amidophosphoribosyltransferase Neighboring gene RRM domain-containing protein Neighboring gene Rad60-SLD domain-containing protein Neighboring gene J domain-containing protein Neighboring gene Suppressor/Enhancer of Lin-12

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

  • Homologs of the T04A8.7 gene: The T04A8.7 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, S.cerevisiae, K.lactis, E.gossypii, M.oryzae, N.crassa, A.thaliana, rice, and frog.
  • Orthologs

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables 1,4-alpha-glucan branching enzyme activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables 1,4-alpha-glucan branching enzyme activity IEA
Inferred from Electronic Annotation
more info
 
enables 1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) IEA
Inferred from Electronic Annotation
more info
 
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 
enables cation binding IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in glycogen biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
1,4-alpha-glucan branching enzyme
NP_497961.1
  • Confirmed by transcript evidence
NP_871631.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    4695357..4698014
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_181902.3NP_871631.1  1,4-alpha-glucan branching enzyme [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_871631.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q86G92
    Conserved Domains (1) summary
    PLN02447
    Location:11606
    PLN02447; 1,4-alpha-glucan-branching enzyme
  2. NM_065560.7NP_497961.1  1,4-alpha-glucan branching enzyme [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_497961.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q22137
    Conserved Domains (1) summary
    PLN02447
    Location:1681
    PLN02447; 1,4-alpha-glucan-branching enzyme
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