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Tc00.1047053508479.390 hypothetical protein [ Trypanosoma cruzi ]

Gene ID: 3553672, updated on 29-Oct-2024
Gene symbol
Tc00.1047053508479.390
Gene description
hypothetical protein
Locus tag
Tc00.1047053508479.390
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trypanosoma cruzi (strain: CL Brener)
Lineage
Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma; Schizotrypanum
Orthologs
all
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Try the new Transcripts and proteins table
See Tc00.1047053508479.390 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_001849463.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene pseudo Neighboring gene pseudo

Genomic Sequence:
NW_001849463.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020725
  2. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

  • homozygous allele located in a merged assembly of Esmeraldo and non-Esmeraldo homologous sequences or a repetitive gene whose different copies were merged during the assembly.

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polynucleotide 5'-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
hypothetical protein
XP_820839.1
  • homozygous allele located in a merged assembly of Esmeraldo and non-Esmeraldo homologous sequences or a repetitive gene whose different copies were merged during the assembly.

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001849463.1 Reference assembly

    Range
    82223..82978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_815746.1 → XP_820839.1  hypothetical protein, conserved [Trypanosoma cruzi]

    See identical proteins and their annotated locations for XP_820839.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2V2VHY9, Q4E2I1
    Conserved Domains (1) summary
    cd07470
    Location:26 → 237
    CYTH-like_mRNA_RTPase; CYTH-like mRNA triphosphatase (RTPase) component of the mRNA capping apparatus
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials