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Tc00.1047053510719.80 hypothetical protein [ Trypanosoma cruzi ]

Gene ID: 3551592, updated on 23-Nov-2023

Summary

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Gene symbol
Tc00.1047053510719.80
Gene description
hypothetical protein
Locus tag
Tc00.1047053510719.80
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trypanosoma cruzi (strain: CL Brener)
Lineage
Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma; Schizotrypanum
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Genomic context

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Location:
chromosome: Unknown
Exon count:
1

NW_001849364.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001849364.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020725
  2. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Repeated regions

  • Loc: 30726-30758 rpt_type = tandem , rpt_unit_seq = gaa , satellite = microsatellite

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mechanosensitive monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monoatomic cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to mechanical stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in detection of mechanical stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_819187.1
  • heterozygous, Esmeraldo-like haplotype
    allele of Tc00.1047053509747.100

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001849364.1 Reference assembly

    Range
    25815..33611
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_814094.1 → XP_819187.1  hypothetical protein, conserved [Trypanosoma cruzi]

    See identical proteins and their annotated locations for XP_819187.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2V2WLW3, Q4DXU9
    Conserved Domains (1) summary
    pfam12166
    Location:2103 → 2538
    Piezo_RRas_bdg; Piezo non-specific cation channel, R-Ras-binding domain
Nucleotide Protein
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