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Tc00.1047053511287.49 prostaglandin F synthase, putative [ Trypanosoma cruzi ]

Gene ID: 3545874, updated on 29-Oct-2024
Gene symbol
Tc00.1047053511287.49
Gene description
prostaglandin F synthase, putative
Locus tag
Tc00.1047053511287.49
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trypanosoma cruzi (strain: CL Brener)
Lineage
Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma; Schizotrypanum
Orthologs
Trypanosoma brucei all
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See Tc00.1047053511287.49 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_001849447.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene 40S ribosomal protein S2, putative Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic Sequence:
NW_001849447.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Structures of prostaglandin F synthase from the protozoa Leishmania major and Trypanosoma cruzi with NADP. Moen SO, et al. Acta Crystallogr F Struct Biol Commun, 2015 May. PMID 25945716, Free PMC Article
  2. The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020725
  3. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The structure of prostaglandin F synthase with cofactor NADP was determined to a resolution of 1.25 A.
    Title: Structures of prostaglandin F synthase from the protozoa Leishmania major and Trypanosoma cruzi with NADP.
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Homology

  • heterozygous, non-Esmeraldo-like haplotype
    allele of Tc00.1047053506213.50

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
prostaglandin F synthase, putative
XP_814362.1
  • 95% identical to GB:AAK58518.1: aldo/keto reductase {Trypanosoma cruzi}
    heterozygous, non-Esmeraldo-like haplotype
    allele of Tc00.1047053506213.50

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001849447.1 Reference assembly

    Range
    577672..578520 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_809269.1 → XP_814362.1  prostaglandin F synthase, putative [Trypanosoma cruzi]

    See identical proteins and their annotated locations for XP_814362.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2S1JL57, A0A2V2XC14
    Conserved Domains (1) summary
    COG0656
    Location:8 → 276
    ARA1; Aldo/keto reductase, related to diketogulonate reductase [Secondary metabolites biosynthesis, transport and catabolism]
Nucleotide Protein
Heading Accession and Version

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