Format

Send to:

Choose Destination

Hcfc1r1 host cell factor C1 regulator 1 (XPO1-dependent) [ Mus musculus (house mouse) ]

Gene ID: 353502, updated on 23-Jun-2021

Summary

Official Symbol
Hcfc1r1provided by MGI
Official Full Name
host cell factor C1 regulator 1 (XPO1-dependent)provided by MGI
Primary source
MGI:MGI:2663619
See related
Ensembl:ENSMUSG00000023904
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
HPIP
Expression
Broad expression in stomach adult (RPKM 169.5), adrenal adult (RPKM 159.4) and 25 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Hcfc1r1 in Genome Data Viewer
Location:
17; 17 A3.3
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (23892578..23894498)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (23673608..23675524)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (23810575..23812491)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene matrix metallopeptidase 25 Neighboring gene ribosomal protein L36 pseudogene Neighboring gene BICD family like cargo adaptor 2 Neighboring gene THO complex 6 Neighboring gene tumor necrosis factor receptor superfamily, member 12a Neighboring gene claudin 6 Neighboring gene claudin 9

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
host cell factor C1 regulator 1
Names
HCF-1 beta-propeller-interacting protein

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_181821.2NP_861542.1  host cell factor C1 regulator 1

    See identical proteins and their annotated locations for NP_861542.1

    Status: VALIDATED

    Source sequence(s)
    AC154766
    Consensus CDS
    CCDS28455.1
    UniProtKB/Swiss-Prot
    Q9CYQ5
    Related
    ENSMUSP00000024697.5, ENSMUST00000024697.5
    Conserved Domains (1) summary
    pfam15226
    Location:2116
    HPIP; HCF-1 beta-propeller-interacting protein family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    23892578..23894498
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036160653.1XP_036016546.1  host cell factor C1 regulator 1 isoform X1

    Related
    ENSMUSP00000137205.2, ENSMUST00000179928.2
    Conserved Domains (1) summary
    pfam15226
    Location:2112
    HPIP; HCF-1 beta-propeller-interacting protein family
Support Center