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LINC00265 long intergenic non-protein coding RNA 265 [ Homo sapiens (human) ]

Gene ID: 349114, updated on 13-May-2022

Summary

Official Symbol
LINC00265provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 265provided by HGNC
Primary source
HGNC:HGNC:28019
See related
AllianceGenome:HGNC:28019
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NCRNA00265
Expression
Broad expression in testis (RPKM 10.9), bone marrow (RPKM 2.5) and 21 other tissues See more
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Genomic context

Location:
7p14.1
Exon count:
12
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (39733568..39794623)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (39891132..39952175)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (39773167..39834222)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986785 Neighboring gene RAS like proto-oncogene A Neighboring gene Sharpr-MPRA regulatory region 6412 Neighboring gene RNA, U6 small nuclear 719, pseudogene Neighboring gene capicua transcriptional repressor pseudogene 22 Neighboring gene uncharacterized LOC101928688 Neighboring gene pleckstrin homology domain containing B2 pseudogene Neighboring gene SSBP3 pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026999.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC004837, AC004987, AI304809, BC038571, BC053841, DA726117

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    39733568..39794623
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    39891132..39952175
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_198284.1: Suppressed sequence

    Description
    NM_198284.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.