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ANKRD18DP ankyrin repeat domain 18D, pseudogene [ Homo sapiens (human) ]

Gene ID: 348840, updated on 23-Nov-2021

Summary

Official Symbol
ANKRD18DPprovided by HGNC
Official Full Name
ankyrin repeat domain 18D, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:28016
See related
Ensembl:ENSG00000226435
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 1.2), brain (RPKM 0.2) and 2 other tissues See more
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Genomic context

See ANKRD18DP in Genome Data Viewer
Location:
3q29
Exon count:
10
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 3 NC_000003.12 (198057531..198080671, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (197784402..197807542, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene leishmanolysin like peptidase Neighboring gene RNA, U6 small nuclear 621, pseudogene Neighboring gene LMLN antisense RNA 1 Neighboring gene Sharpr-MPRA regulatory region 12303 Neighboring gene RNA, U6 small nuclear 821, pseudogene Neighboring gene FSHD region gene 2 family member F, pseudogene Neighboring gene tubulin beta 8 class VIII pseudogene 8

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003291.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    BC042518
    Related
    ENST00000435620.6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p13 Primary Assembly

    Range
    198057531..198080671 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_1

Genomic

  1. NT_187539.1 Reference GRCh38.p13 ALT_REF_LOCI_1

    Range
    151282..174422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_182631.1: Suppressed sequence

    Description
    NM_182631.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
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