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LNP1 leukemia NUP98 fusion partner 1 [ Homo sapiens (human) ]

Gene ID: 348801, updated on 5-Sep-2021

Summary

Official Symbol
LNP1provided by HGNC
Official Full Name
leukemia NUP98 fusion partner 1provided by HGNC
Primary source
HGNC:HGNC:28014
See related
Ensembl:ENSG00000206535
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NP3
Expression
Broad expression in testis (RPKM 17.5), kidney (RPKM 4.6) and 20 other tissues See more
Orthologs
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Genomic context

See LNP1 in Genome Data Viewer
Location:
3q12.2
Exon count:
4
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 3 NC_000003.12 (100401539..100456319)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (100120383..100175163)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene nitrilase family member 2 Neighboring gene translocase of outer mitochondrial membrane 70 Neighboring gene transmembrane protein 45A Neighboring gene adhesion G protein-coupled receptor G7 Neighboring gene glia maturation factor beta pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

General protein information

Preferred Names
leukemia NUP98 fusion partner 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001085451.2NP_001078920.1  leukemia NUP98 fusion partner 1

    See identical proteins and their annotated locations for NP_001078920.1

    Status: VALIDATED

    Source sequence(s)
    BC040562
    Consensus CDS
    CCDS43120.1
    UniProtKB/Swiss-Prot
    A1A4G5
    Related
    ENSP00000373191.3, ENST00000383693.8
    Conserved Domains (1) summary
    pfam15419
    Location:11175
    LNP1; Leukemia NUP98 fusion partner 1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p13 Primary Assembly

    Range
    100401539..100456319
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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