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FAM131C family with sequence similarity 131 member C [ Homo sapiens (human) ]

Gene ID: 348487, updated on 6-Sep-2022

Summary

Official Symbol
FAM131Cprovided by HGNC
Official Full Name
family with sequence similarity 131 member Cprovided by HGNC
Primary source
HGNC:HGNC:26717
See related
Ensembl:ENSG00000185519 AllianceGenome:HGNC:26717
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C1orf117
Expression
Biased expression in kidney (RPKM 2.5), brain (RPKM 1.7) and 10 other tissues See more
Orthologs
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Genomic context

See FAM131C in Genome Data Viewer
Location:
1p36.13
Exon count:
7
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (16057769..16073651, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (15499150..15515031, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (16384264..16400146, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene CLCNKA recombination region Neighboring gene family with sequence similarity 131 member C pseudogene Neighboring gene CLCNKB recombination region Neighboring gene chloride voltage-gated channel Kb Neighboring gene EPH receptor A2 Neighboring gene EPHA2 antisense RNA 1 Neighboring gene hESC enhancers GRCh37_chr1:16488540-16489068 and GRCh37_chr1:16489069-16489596

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ36766

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_182623.3NP_872429.2  protein FAM131C

    See identical proteins and their annotated locations for NP_872429.2

    Status: VALIDATED

    Source sequence(s)
    AK094085, AL355994, AL529663, BC016848, BC037394, BG751253, DA112406
    Consensus CDS
    CCDS41270.1
    UniProtKB/Swiss-Prot
    Q8N9P9, Q96AQ9
    Related
    ENSP00000364814.4, ENST00000375662.5
    Conserved Domains (1) summary
    pfam15010
    Location:78173
    FAM131; Putative cell signalling

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    16057769..16073651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    15499150..15515031 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)