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CCDC144CP coiled-coil domain containing 144C, pseudogene [ Homo sapiens (human) ]

Gene ID: 348254, updated on 29-Mar-2018

Summary

Official Symbol
CCDC144CPprovided by HGNC
Official Full Name
coiled-coil domain containing 144C, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:29073
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CCDC144C
Expression
Broad expression in testis (RPKM 7.0), placenta (RPKM 2.0) and 15 other tissues See more

Genomic context

See CCDC144CP in Genome Data Viewer
Location:
17p11.2
Exon count:
16
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 17 NC_000017.11 (20321174..20402191)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (20224487..20305504)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene sperm antigen with calponin homology and coiled-coil domains 1 Neighboring gene RNA, U6 small nuclear 258, pseudogene Neighboring gene RNA, U6 small nuclear 1057, pseudogene Neighboring gene RNA, U6 small nuclear 467, pseudogene Neighboring gene UPF3A pseudogene 2 Neighboring gene ubiquitin specific peptidase 32 pseudogene 3 Neighboring gene signal recognition particle 68 pseudogene 3 Neighboring gene family with sequence similarity 106 member B

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_023380.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC008088, AC015818, AL162090, AL162091, DA321951, DV080283, DV080284

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p12 Primary Assembly

    Range
    20321174..20402191
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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