U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINC01193 long intergenic non-protein coding RNA 1193 [ Homo sapiens (human) ]

Gene ID: 348120, updated on 23-Oct-2022

Summary

Official Symbol
LINC01193provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1193provided by HGNC
Primary source
HGNC:HGNC:28003
See related
Ensembl:ENSG00000258710 AllianceGenome:HGNC:28003
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CT60
Expression
Restricted expression toward testis (RPKM 1.6) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LINC01193 in Genome Data Viewer
Location:
15q11.2
Exon count:
5
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (20940438..20993304)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (21145767..21198633)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene neurofibromin 1 pseudogene 1 Neighboring gene microRNA 5701-1 Neighboring gene olfactory receptor family 11 subfamily J member 2 pseudogene Neighboring gene olfactory receptor family 11 subfamily J member 5 pseudogene Neighboring gene immunoglobulin heavy diversity 5/OR15-5B (non-functional) Neighboring gene family with sequence similarity 30 member C Neighboring gene disintegrin and metalloproteinase domain-containing protein 21-like

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • cancer/testis antigen 60 (non-protein coding)

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040094.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC037471, BC047459
    Related
    ENST00000553416.5

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    20940438..20993304
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_021160017.1 Reference GRCh38.p14 PATCHES

    Range
    1185359..1238261
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)