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Hsp60D Heat shock protein 60D [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34763, updated on 10-Jan-2019

Summary

Official Symbol
Hsp60Dprovided by FlyBase
Official Full Name
Heat shock protein 60Dprovided by FlyBase
Primary source
FLYBASE:FBgn0032525
Locus tag
Dmel_CG16954
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster (old-lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG16954; Dmel\CG16954; HSP60D

Genomic context

See Hsp60D in Genome Data Viewer
Location:
34C1-34C1; 2-48 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.18 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (13447538..13449497, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (13447538..13449497, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene tehao Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

Pathways from BioSystems

  • RNA degradation, organism-specific biosystem (from KEGG)
    RNA degradation, organism-specific biosystemThe correct processing, quality control and turnover of cellular RNA molecules are critical to many aspects in the expression of genetic information. In eukaryotes, two major pathways of mRNA decay e...
  • RNA degradation, conserved biosystem (from KEGG)
    RNA degradation, conserved biosystemThe correct processing, quality control and turnover of cellular RNA molecules are critical to many aspects in the expression of genetic information. In eukaryotes, two major pathways of mRNA decay e...

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
unfolded protein binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
'de novo' protein folding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
'de novo' protein folding ISS
Inferred from Sequence or Structural Similarity
more info
 
apoptotic mitochondrial changes IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
apoptotic process IGI
Inferred from Genetic Interaction
more info
PubMed 
mitochondrion organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein import into mitochondrial intermembrane space IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein refolding IEA
Inferred from Electronic Annotation
more info
 
protein targeting to mitochondrion ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mitochondrial matrix ISS
Inferred from Sequence or Structural Similarity
more info
 
mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
heat shock protein 60D
Names
CG16954-PA
CG16954-PB
Hsp60D-PA
Hsp60D-PB

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    13447538..13449497 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_135812.2NP_609656.1  heat shock protein 60D, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609656.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VJX7
    Related
    FBpp0080095, FBtr0080517
    Conserved Domains (2) summary
    PTZ00114
    Location:13546
    PTZ00114; Heat shock protein 60; Provisional
    cd03344
    Location:18536
    GroEL; GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found ...
  2. NM_165043.2NP_723818.1  heat shock protein 60D, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_723818.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VJX7
    Related
    FBpp0080096, FBtr0080518
    Conserved Domains (2) summary
    PTZ00114
    Location:13546
    PTZ00114; Heat shock protein 60; Provisional
    cd03344
    Location:18536
    GroEL; GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found ...
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