Format

Send to:

Choose Destination

CG5421 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34661, updated on 10-Oct-2019

Summary

Official Symbol
CG5421provided by FlyBase
Primary source
FLYBASE:FBgn0032434
Locus tag
Dmel_CG5421
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG5421

Genomic context

See CG5421 in Genome Data Viewer
Location:
33E5-33E5; 2-46 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.26 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (12446080..12448132, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (12446080..12448132, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene SR family splicing factor SC35 Neighboring gene eukaryotic translation release factor 3 Neighboring gene Organic anion transporting polypeptide 33Ea Neighboring gene Organic anion transporting polypeptide 33Eb Neighboring gene uncharacterized protein Neighboring gene pseudo

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
proton-transporting ATP synthase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 
proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
regulation of cellular pH IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
plasma membrane proton-transporting V-type ATPase complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
uncharacterized protein
Names
CG5421-PA
CG5421-PB
NP_001260418.1
NP_609569.1

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    12446080..12448132 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001273489.1NP_001260418.1  uncharacterized protein Dmel_CG5421, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260418.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VK83
    Related
    FBpp0305304, FBtr0333091
  2. NM_135725.3NP_609569.1  uncharacterized protein Dmel_CG5421, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609569.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VK83
    Related
    FBpp0079965, FBtr0080383
Support Center