Format

Send to:

Choose Destination

ACTBL2 actin beta like 2 [ Homo sapiens (human) ]

Gene ID: 345651, updated on 1-Jun-2020

Summary

Official Symbol
ACTBL2provided by HGNC
Official Full Name
actin beta like 2provided by HGNC
Primary source
HGNC:HGNC:17780
See related
Ensembl:ENSG00000169067 MIM:614835
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ACT
Orthologs

Genomic context

See ACTBL2 in Genome Data Viewer
Location:
5q11.2
Exon count:
1
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (57480018..57482811, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (56775843..56778636, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) pseudogene Neighboring gene spalt like transcription factor 4 pseudogene 1 Neighboring gene uncharacterized LOC102724122 Neighboring gene uncharacterized LincR-0003

Genomic regions, transcripts, and products

Bibliography

Phenotypes

NHGRI GWAS Catalog

Description
A genome-wide search for loci interacting with known prostate cancer risk-associated genetic variants.
NHGRI GWA Catalog
Genome-wide association study of orthostatic hypotension and supine-standing blood pressure changes in two korean populations.
NHGRI GWA Catalog

HIV-1 interactions

Protein interactions

Protein Gene Interaction Pubs
Vpr vpr A stable-isotope labeling by amino acids in cell culture coupled with mass spectrometry-based proteomics identifies downregulation of actin, beta-like 2 (ACTBL2) expression by HIV-1 Vpr in Vpr transduced macrophages PubMed

Go to the HIV-1, Human Interaction Database

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • DKFZp686D0972

Gene Ontology Provided by GOA

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
molecular_function ND
No biological Data available
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
structural constituent of postsynaptic actin cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
postsynaptic actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
actin filament IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
extracellular exosome HDA PubMed 
extracellular space HDA PubMed 
glutamatergic synapse IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
presynapse IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
beta-actin-like protein 2
Names
actin-like protein
kappa-actin

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017992.4NP_001017992.1  beta-actin-like protein 2

    See identical proteins and their annotated locations for NP_001017992.1

    Status: VALIDATED

    Source sequence(s)
    AC025470, BX648504
    Consensus CDS
    CCDS34163.1
    UniProtKB/Swiss-Prot
    Q562R1
    Related
    ENSP00000416706.1, ENST00000423391.3
    Conserved Domains (1) summary
    cl17037
    Location:1376
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

    Range
    57480018..57482811 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center