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AOX2P aldehyde oxidase 2, pseudogene [ Homo sapiens (human) ]

Gene ID: 344454, updated on 25-Jan-2022

Summary

Official Symbol
AOX2Pprovided by HGNC
Official Full Name
aldehyde oxidase 2, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:18450
See related
Ensembl:ENSG00000243478 AllianceGenome:HGNC:18450
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
AOH2; AOX2; AOX3L1
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Genomic context

See AOX2P in Genome Data Viewer
Location:
2q33.1
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (200738639..200791636)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (201603362..201656359)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene aldehyde oxidase 1 Neighboring gene AOX3P-AOX2P readthrough, transcribed pseudogene Neighboring gene aldehyde oxidase 3, pseudogene Neighboring gene long intergenic non-protein coding RNA 1792 Neighboring gene RNA, U1 small nuclear 133, pseudogene Neighboring gene AOX3P-AOX2P intron CAGE-defined mid-level expression enhancer Neighboring gene BZW1 antisense RNA 1 Neighboring gene RNA, U6 small nuclear 31, pseudogene Neighboring gene basic leucine zipper and W2 domains 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

EBI GWAS Catalog

Description
Genome-wide association study of intelligence: additive effects of novel brain expressed genes.
EBI GWAS Catalog
Genome-wide pharmacogenomic study of citalopram-induced side effects in STAR*D.
EBI GWAS Catalog

General gene information

Markers

Readthrough AOX3P-AOX2P

Readthrough gene: AOX3P-AOX2P, Included gene: AOX3P

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_046632.1 

    Range
    101..53098
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    200738639..200791636
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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