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Nse4 Non-SMC element 4 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34434, updated on 28-Aug-2019

Summary

Official Symbol
Nse4provided by FlyBase
Official Full Name
Non-SMC element 4provided by FlyBase
Primary source
FLYBASE:FBgn0032251
Locus tag
Dmel_CG13142
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG13142; Dmel\CG13142

Genomic context

See Nse4 in Genome Data Viewer
Location:
31E2-31E2; 2-42 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.26 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (10439440..10441047)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (10439440..10441047)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene hole-in-one Neighboring gene STIP1 homology and U-box containing protein 1 Neighboring gene long non-coding RNA:CR45375 Neighboring gene lonely heart

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
contributes_to SUMO transferase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
DNA repair IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
DNA repair ISS
Inferred from Sequence or Structural Similarity
more info
 
positive regulation of response to DNA damage stimulus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
Smc5-Smc6 complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Smc5-Smc6 complex ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
Non-SMC element 4
Names
CG13142-PB
CG13142-PC
Nse4-PB
Nse4-PC

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    10439440..10441047
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_135561.3NP_609405.2  Non-SMC element 4, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609405.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VKV4
    Related
    FBpp0271847, FBtr0273339
    Conserved Domains (1) summary
    pfam08743
    Location:200282
    Nse4_C; Nse4 C-terminal
  2. NM_001169467.1NP_001162938.1  Non-SMC element 4, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001162938.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VKV4
    Related
    FBpp0290390, FBtr0301167
    Conserved Domains (1) summary
    pfam08743
    Location:200282
    Nse4_C; Nse4 C-terminal
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