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gny garnysstan [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34409, updated on 8-Oct-2018

Summary

Official Symbol
gnyprovided by FlyBase
Official Full Name
garnysstanprovided by FlyBase
Primary source
FLYBASE:FBgn0032234
Locus tag
Dmel_CG5091
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster (old-lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
alg6; CG5091; dAlg6; Dalg6; Dmel\CG5091; Gny[

Genomic context

See gny in Genome Data Viewer
Location:
31D11-31D11; 2-41 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.13 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (10380103..10382864)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (10380103..10382864)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene rhomboid-5 Neighboring gene uncharacterized protein Neighboring gene defective proboscis extension response 19 Neighboring gene uncharacterized protein Neighboring gene Cyclin-dependent kinase 1 Neighboring gene mitochondrial ribosomal protein S7

Genomic regions, transcripts, and products

Pathways from BioSystems

General gene information

Homology

  • Homologs of the gny gene: The gny gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, and frog.

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
glucosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
chitin-based cuticle development IMP
Inferred from Mutant Phenotype
more info
PubMed 
oligosaccharide-lipid intermediate biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein N-linked glycosylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein N-linked glycosylation ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
endoplasmic reticulum ISS
Inferred from Sequence or Structural Similarity
more info
 
endoplasmic reticulum membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
garnysstan
Names
CG5091-PA
CG5091-PB
gny-PA
gny-PB
NP_001260338.1
NP_609393.1

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    10380103..10382864
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_135549.4NP_609393.1  garnysstan, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609393.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VKX7
    UniProtKB/TrEMBL
    M9PB91
    Related
    FBpp0079595, FBtr0080005
    Conserved Domains (1) summary
    pfam03155
    Location:30463
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family
  2. NM_001273409.1NP_001260338.1  garnysstan, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260338.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VKX7
    UniProtKB/TrEMBL
    M9PB91
    Related
    FBpp0304502, FBtr0332193
    Conserved Domains (1) summary
    pfam03155
    Location:30463
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family
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