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XKR7 XK related 7 [ Homo sapiens (human) ]

Gene ID: 343702, updated on 13-May-2022

Summary

Official Symbol
XKR7provided by HGNC
Official Full Name
XK related 7provided by HGNC
Primary source
HGNC:HGNC:23062
See related
Ensembl:ENSG00000260903 AllianceGenome:HGNC:23062
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C20orf159; dJ310O13.4
Summary
Predicted to be involved in apoptotic process involved in development; engulfment of apoptotic cell; and phosphatidylserine exposure on apoptotic cell surface. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See XKR7 in Genome Data Viewer
Location:
20q11.21
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (31968151..32003387)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (33692782..33728019)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (30555954..30591190)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene tubulin tyrosine ligase like 9 Neighboring gene Sharpr-MPRA regulatory region 918 Neighboring gene p53 and DNA damage regulated 1 Neighboring gene RNA, 5S ribosomal pseudogene 481 Neighboring gene CCM2 like scaffold protein

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in apoptotic process involved in development IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in engulfment of apoptotic cell IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in phosphatidylserine exposure on apoptotic cell surface IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
XK-related protein 7
Names
X Kell blood group precursor-related family, member 7
X-linked Kx blood group related 7
XK, Kell blood group complex subunit-related family, member 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001011718.2NP_001011718.1  XK-related protein 7

    See identical proteins and their annotated locations for NP_001011718.1

    Status: VALIDATED

    Source sequence(s)
    AL031658, AY534245
    Consensus CDS
    CCDS33459.1
    UniProtKB/Swiss-Prot
    Q5GH72
    Related
    ENSP00000477059.1, ENST00000562532.3
    Conserved Domains (1) summary
    pfam09815
    Location:59442
    XK-related; XK-related protein

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    31968151..32003387
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    33692782..33728019
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)