Format

Send to:

Choose Destination

DYNLT4 dynein light chain Tctex-type 4 [ Homo sapiens (human) ]

Gene ID: 343521, updated on 23-Nov-2021

Summary

Official Symbol
DYNLT4provided by HGNC
Official Full Name
dynein light chain Tctex-type 4provided by HGNC
Primary source
HGNC:HGNC:32315
See related
Ensembl:ENSG00000188396 MIM:611713
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TCTEX1D4
Expression
Ubiquitous expression in esophagus (RPKM 3.3), appendix (RPKM 2.9) and 25 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See DYNLT4 in Genome Data Viewer
Location:
1p34.1
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (44805893..44807351, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (45271565..45273023, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ribosomal protein S15a pseudogene 11 Neighboring gene bestrophin 4 Neighboring gene polo like kinase 3 Neighboring gene BTB domain containing 19 Neighboring gene uncharacterized LOC107984952 Neighboring gene RNA, U5E small nuclear 6, pseudogene Neighboring gene patched 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables dynein intermediate chain binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein phosphatase 1 binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in microtubule-based movement IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in acrosomal vesicle IDA
Inferred from Direct Assay
more info
PubMed 
located_in axoneme IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of cytoplasmic dynein complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in microtubule organizing center IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in sperm flagellum IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
dynein light chain Tctex-type 4
Names
Tctex1 domain containing 4
Tctex2 beta
novel Tctex-1 family domain-containing protein
protein N22.1
tctex-2-beta
tctex1 domain-containing protein 4

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001013632.4NP_001013654.1  dynein light chain Tctex-type 4

    See identical proteins and their annotated locations for NP_001013654.1

    Status: VALIDATED

    Source sequence(s)
    AL592166, BC092499, DQ132441
    Consensus CDS
    CCDS30699.1
    UniProtKB/Swiss-Prot
    Q5JR98
    Related
    ENSP00000501642.1, ENST00000675259.1
    Conserved Domains (1) summary
    cl41776
    Location:108221
    DLC-like_SF; dynein light chain (DLC)-like domain superfamily
  2. NM_001377534.1NP_001364463.1  dynein light chain Tctex-type 4

    Status: VALIDATED

    Source sequence(s)
    AL592166
    Related
    ENSP00000341803.2, ENST00000339355.3
    Conserved Domains (1) summary
    cl41776
    Location:108221
    DLC-like_SF; dynein light chain (DLC)-like domain superfamily
  3. NM_001377535.1NP_001364464.1  dynein light chain Tctex-type 4

    Status: VALIDATED

    Source sequence(s)
    AL592166
    Conserved Domains (1) summary
    cl41776
    Location:108221
    DLC-like_SF; dynein light chain (DLC)-like domain superfamily
  4. NM_001377536.1NP_001364465.1  dynein light chain Tctex-type 4

    Status: VALIDATED

    Source sequence(s)
    AL592166
    Conserved Domains (1) summary
    cl41776
    Location:108221
    DLC-like_SF; dynein light chain (DLC)-like domain superfamily

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    44805893..44807351 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center