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Dref DNA replication-related element factor [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34328, updated on 4-Dec-2018

Summary

Official Symbol
Drefprovided by FlyBase
Official Full Name
DNA replication-related element factorprovided by FlyBase
Primary source
FLYBASE:FBgn0015664
Locus tag
Dmel_CG5838
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster (old-lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG5838; dDREF; DmDREF; Dmel\CG5838; Dmel_DREF; dref; DREF; p80; p80/DREF

Genomic context

See Dref in Genome Data Viewer
Location:
30F2-30F3; 2-38 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.13 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (9964147..9967229, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (9964147..9967229, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene Ribosomal protein L13 Neighboring gene ncRNA Neighboring gene big brain

Genomic regions, transcripts, and products

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
DNA-binding transcription factor activity TAS
Traceable Author Statement
more info
PubMed 
calcium ion binding ISS
Inferred from Sequence or Structural Similarity
more info
 
transcription regulatory region sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
DNA endoreduplication IMP
Inferred from Mutant Phenotype
more info
PubMed 
DNA replication TAS
Traceable Author Statement
more info
PubMed 
chaeta development IMP
Inferred from Mutant Phenotype
more info
PubMed 
compound eye development IMP
Inferred from Mutant Phenotype
more info
PubMed 
compound eye morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
dendrite morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
mitochondrial DNA replication TAS
Traceable Author Statement
more info
PubMed 
positive regulation of gene expression IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of transcription, DNA-templated IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein autophosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
 
protein phosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
 
regulation of DNA biosynthetic process IDA
Inferred from Direct Assay
more info
PubMed 
regulation of apoptotic process IDA
Inferred from Direct Assay
more info
PubMed 
regulation of cell cycle NAS
Non-traceable Author Statement
more info
PubMed 
regulation of cell proliferation involved in compound eye morphogenesis IDA
Inferred from Direct Assay
more info
PubMed 
regulation of mitochondrial depolarization IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of transcription, DNA-templated TAS
Traceable Author Statement
more info
PubMed 
sensory organ precursor cell division IMP
Inferred from Mutant Phenotype
more info
PubMed 
transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
polytene chromosome IDA
Inferred from Direct Assay
more info
PubMed 
transcription factor complex IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
DNA replication-related element factor
Names
CG5838-PA
CG5838-PB
DNA
DNA replication-related element binding factor
DNA replication-related element-binding factor
DNA-replication-related element factor
DRE (DNA replication-related element) binding factor
DRE-binding factor
Dref-PA
Dref-PB
replication-related element-binding factor

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    9964147..9967229 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_078805.4NP_523529.1  DNA replication-related element factor, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_523529.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q94883
    Related
    FBpp0079485, FBtr0079889
    Conserved Domains (1) summary
    pfam02892
    Location:3584
    zf-BED; BED zinc finger
  2. NM_001273382.2NP_001260311.1  DNA replication-related element factor, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260311.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q94883
    Related
    FBpp0302627, FBtr0310483
    Conserved Domains (1) summary
    pfam02892
    Location:3584
    zf-BED; BED zinc finger
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