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PRAMEF10 PRAME family member 10 [ Homo sapiens (human) ]

Gene ID: 343071, updated on 11-Jun-2021

Summary

Official Symbol
PRAMEF10provided by HGNC
Official Full Name
PRAME family member 10provided by HGNC
Primary source
HGNC:HGNC:27997
See related
Ensembl:ENSG00000187545
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward liver (RPKM 6.5) See more
Orthologs
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Genomic context

See PRAMEF10 in Genome Data Viewer
Location:
1p36.21
Exon count:
4
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (12892896..12898270, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (12952727..12958101, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene PRAME family member 2 Neighboring gene PRAME family member 4 Neighboring gene PRAME family member 7 Neighboring gene RNA, U6 small nuclear 1072, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC138413, MGC138415

Gene Ontology Provided by GOA

Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039361.4NP_001034450.3  PRAME family member 10

    Status: VALIDATED

    Source sequence(s)
    AC245034
    Consensus CDS
    CCDS41255.1
    UniProtKB/Swiss-Prot
    O60809
    Related
    ENSP00000235347.4, ENST00000235347.4

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    12892896..12898270 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_012132914.1 Reference GRCh38.p13 PATCHES

    Range
    74409..79783 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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