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tai taiman [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34242, updated on 28-Aug-2019

Summary

Official Symbol
taiprovided by FlyBase
Official Full Name
taimanprovided by FlyBase
Primary source
FLYBASE:FBgn0041092
Locus tag
Dmel_CG13109
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
58/2; bs13g05.y1; CG13109; CG18494; DAIB1; Dmel\CG13109; DmTaiman; EP(2)2630; l(2)01351; l(2)k05802; l(2)k05809; NEST:bs13g05; Tai; TAI; Taiman

Genomic context

See tai in Genome Data Viewer
Location:
30A2-30A6; 2-35 cM
Exon count:
15
Annotation release Status Assembly Chr Location
Release 6.26 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (9166778..9250211)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (9166778..9250211)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene transfer RNA:Threonine-AGT 1-1 Neighboring gene pseudo Neighboring gene australin Neighboring gene borealin-related

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

mobile_element

  • Loc: 9194175-9194262 mobile_element_type = transposon:INE-1{}5737

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
nuclear hormone receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nuclear receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nuclear receptor transcription coactivator activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nuclear receptor transcription coactivator activity IDA
Inferred from Direct Assay
more info
PubMed 
protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 
steroid hormone receptor binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
axon extension IMP
Inferred from Mutant Phenotype
more info
PubMed 
border follicle cell migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
cellular response to hormone stimulus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
germ-line stem-cell niche homeostasis IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of border follicle cell migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of growth IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
regulation of transcription, DNA-templated ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
taiman
Names
CG13109-PC
CG13109-PD
CG13109-PE
CG13109-PF
CG13109-PG
CG13109-PH
drosophila amplified in breast cancer-1
tai-PC
tai-PD
tai-PE
tai-PF
tai-PG
tai-PH

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    9166778..9250211
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001259020.2NP_001245949.1  taiman, isoform G [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001245949.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9ND53
    Related
    FBpp0293513, FBtr0304974
    Conserved Domains (3) summary
    smart00091
    Location:377442
    PAS; PAS domain
    cd00083
    Location:235286
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    pfam14598
    Location:591711
    PAS_11; PAS domain
  2. NM_078797.4NP_523521.3  taiman, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_523521.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VLD9
    Related
    FBpp0292874, FBtr0303871
    Conserved Domains (3) summary
    smart00091
    Location:377442
    PAS; PAS domain
    cd00083
    Location:235286
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    pfam14598
    Location:591711
    PAS_11; PAS domain
  3. NM_001273351.1NP_001260280.1  taiman, isoform H [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260280.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9MRG5
    Related
    FBpp0305597, FBtr0333405
    Conserved Domains (3) summary
    smart00091
    Location:377442
    PAS; PAS domain
    cd00083
    Location:235286
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    pfam14598
    Location:591711
    PAS_11; PAS domain
  4. NM_001201819.2NP_001188748.1  taiman, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001188748.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9MRG5
    Related
    FBpp0292876, FBtr0303873
    Conserved Domains (3) summary
    smart00091
    Location:377442
    PAS; PAS domain
    cd00083
    Location:235286
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    pfam14598
    Location:591711
    PAS_11; PAS domain
  5. NM_001201818.1NP_001188747.1  taiman, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001188747.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9MRJ8
    Related
    FBpp0292875, FBtr0303872
    Conserved Domains (3) summary
    smart00091
    Location:377442
    PAS; PAS domain
    cd00083
    Location:235286
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    pfam14598
    Location:591711
    PAS_11; PAS domain
  6. NM_001201817.1NP_001188746.1  taiman, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001188746.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VLD9
    Related
    FBpp0292873, FBtr0303870
    Conserved Domains (3) summary
    smart00091
    Location:377442
    PAS; PAS domain
    cd00083
    Location:235286
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    pfam14598
    Location:591711
    PAS_11; PAS domain
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