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C11orf53 chromosome 11 open reading frame 53 [ Homo sapiens (human) ]

Gene ID: 341032, updated on 11-Jun-2021

Summary

Official Symbol
C11orf53provided by HGNC
Official Full Name
chromosome 11 open reading frame 53provided by HGNC
Primary source
HGNC:HGNC:30527
See related
Ensembl:ENSG00000150750
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 1.3), colon (RPKM 0.7) and 13 other tissues See more
Orthologs
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Genomic context

See C11orf53 in Genome Data Viewer
Location:
11q23.1
Exon count:
6
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 11 NC_000011.10 (111245725..111286401)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (111116450..111157126)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102723966 Neighboring gene long intergenic non-protein coding RNA 2550 Neighboring gene ribosomal protein S17 pseudogene 15 Neighboring gene colorectal cancer associated 1 Neighboring gene colorectal cancer associated 2 Neighboring gene uncharacterized LOC105369491

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • MGC50104

General protein information

Preferred Names
uncharacterized protein C11orf53

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_198498.3NP_940900.2  uncharacterized protein C11orf53

    Status: VALIDATED

    Source sequence(s)
    AP002448
    Consensus CDS
    CCDS31674.1
    Related
    ENSP00000280325.6, ENST00000280325.7
    Conserved Domains (1) summary
    pfam17721
    Location:55288
    DUF5566; Family of unknown function (DUF5566)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p13 Primary Assembly

    Range
    111245725..111286401
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011542804.2XP_011541106.1  uncharacterized protein C11orf53 isoform X2

    See identical proteins and their annotated locations for XP_011541106.1

    UniProtKB/Swiss-Prot
    Q8IXP5
    Related
    ENSP00000489630.1, ENST00000637637.1
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