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CG6441 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34029, updated on 4-Apr-2024

Summary

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Official Symbol
CG6441provided by FlyBase
Primary source
FLYBASE:FBgn0031920
Locus tag
Dmel_CG6441
See related
AllianceGenome:FB:FBgn0031920
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-WO0140519.45; Dmel\CG6441
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Genomic context

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See CG6441 in Genome Data Viewer
Location:
28A1-28A1; 2-27 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (7474704..7476952)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (7474704..7476952)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Gustatory receptor 28b Neighboring gene uncharacterized protein Neighboring gene Zizimin Neighboring gene Rap GTPase activating protein 1 Neighboring gene Odorant-binding protein 28a Neighboring gene long non-coding RNA:CR44082

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular evidence for increased regulatory conservation during metamorphosis, and against deleterious cascading effects of hybrid breakdown in Drosophila. Artieri CG, et al. BMC Biol, 2010 Mar 31. PMID 20356354, Free PMC Article
  2. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
  3. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
  4. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
  5. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article

See all (18) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG6441-PA
CG6441-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    7474704..7476952
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_135280.4 → NP_609124.3  uncharacterized protein Dmel_CG6441, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609124.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VM05, W8P2I4
    Conserved Domains (1) summary
    pfam07145
    Location:30 → 45
    PAM2; Ataxin-2 C-terminal region

  2. NM_164753.3 → NP_723282.3  uncharacterized protein Dmel_CG6441, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_723282.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8WHD6, Q8IPI0
    Conserved Domains (1) summary
    pfam07145
    Location:30 → 45
    PAM2; Ataxin-2 C-terminal region
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8IPI0 Q8IPI0
Q8T482 Q8T482
Q9VM05 Q9VM05

Gene LinkOut

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