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MAP3K20-AS1 MAP3K20 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 339751, updated on 13-May-2022

Summary

Official Symbol
MAP3K20-AS1provided by HGNC
Official Full Name
MAP3K20 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:27935
See related
Ensembl:ENSG00000238133 AllianceGenome:HGNC:27935
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MLK7-AS1
Expression
Broad expression in heart (RPKM 6.8), endometrium (RPKM 4.1) and 22 other tissues See more
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Genomic context

See MAP3K20-AS1 in Genome Data Viewer
Location:
2q31.1
Exon count:
8
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (173197712..173282036, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (173684280..173768605, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (174062440..174146764, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene pyruvate dehydrogenase kinase 1 Neighboring gene RAPGEF4 antisense RNA 1 Neighboring gene Rap guanine nucleotide exchange factor 4 Neighboring gene aldehyde dehydrogenase 7 family member A1 pseudogene 2 Neighboring gene mitogen-activated protein kinase kinase kinase 20 Neighboring gene VISTA enhancer hs242 Neighboring gene uncharacterized LOC105373743 Neighboring gene ribosomal protein S2 pseudogene 18

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • MLK7 antisense RNA 1 (non-protein coding)

Clone Names

  • AC013461.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033882.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC013461, BC040565
    Related
    ENST00000423106.2

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    173197712..173282036 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    173684280..173768605 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)