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ARMH1 armadillo like helical domain containing 1 [ Homo sapiens (human) ]

Gene ID: 339541, updated on 23-Nov-2021

Summary

Official Symbol
ARMH1provided by HGNC
Official Full Name
armadillo like helical domain containing 1provided by HGNC
Primary source
HGNC:HGNC:34345
See related
Ensembl:ENSG00000198520
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
p40; C1orf228; NCRNA00082
Expression
Biased expression in bone marrow (RPKM 8.3), testis (RPKM 3.2) and 6 other tissues See more
Orthologs
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Genomic context

See ARMH1 in Genome Data Viewer
Location:
1p34.1
Exon count:
17
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (44674696..44725591)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (45140386..45191263)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ring finger protein 220 Neighboring gene uncharacterized LOC107984950 Neighboring gene transmembrane protein 53 Neighboring gene small nucleolar RNA, C/D box 145 Neighboring gene uncharacterized LOC105378690 Neighboring gene Sharpr-MPRA regulatory region 12667 Neighboring gene Sharpr-MPRA regulatory region 12642 Neighboring gene RNA, U5F small nuclear 1 Neighboring gene RNA, U5D small nuclear 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC33556

General protein information

Preferred Names
armadillo-like helical domain containing protein 1
Names
uncharacterized protein C1orf228

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001145636.2NP_001139108.1  armadillo-like helical domain containing protein 1

    See identical proteins and their annotated locations for NP_001139108.1

    Status: VALIDATED

    Source sequence(s)
    AL122004, AY254217, BC026115, BX112141
    Consensus CDS
    CCDS53311.1
    UniProtKB/Swiss-Prot
    Q6PIY5
    Related
    ENSP00000440524.1, ENST00000535358.6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    44674696..44725591
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017001145.1XP_016856634.1  armadillo-like helical domain containing protein 1 isoform X8

    Conserved Domains (1) summary
    pfam17741
    Location:1242
    DUF5578; Family of unknown function (DUF5578)
  2. XM_017001146.2XP_016856635.1  armadillo-like helical domain containing protein 1 isoform X9

    Related
    ENSP00000420664.1, ENST00000441519.5
    Conserved Domains (1) summary
    pfam17741
    Location:1242
    DUF5578; Family of unknown function (DUF5578)
  3. XM_017001144.1XP_016856633.1  armadillo-like helical domain containing protein 1 isoform X7

    Conserved Domains (1) summary
    pfam17741
    Location:1268
    DUF5578; Family of unknown function (DUF5578)
  4. XM_017001147.1XP_016856636.1  armadillo-like helical domain containing protein 1 isoform X10

    Related
    ENSP00000417998.1, ENST00000445071.5
    Conserved Domains (1) summary
    pfam17741
    Location:1241
    DUF5578; Family of unknown function (DUF5578)
  5. XM_011541349.2XP_011539651.1  armadillo-like helical domain containing protein 1 isoform X5

    Conserved Domains (1) summary
    pfam17741
    Location:1198
    DUF5578; Family of unknown function (DUF5578)
  6. XM_011541340.1XP_011539642.1  armadillo-like helical domain containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011539642.1

    Conserved Domains (1) summary
    pfam17741
    Location:1268
    DUF5578; Family of unknown function (DUF5578)
  7. XM_017001140.1XP_016856629.1  armadillo-like helical domain containing protein 1 isoform X3

    Conserved Domains (1) summary
    pfam17741
    Location:1268
    DUF5578; Family of unknown function (DUF5578)
  8. XM_006710603.2XP_006710666.1  armadillo-like helical domain containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_006710666.1

    Conserved Domains (1) summary
    pfam17741
    Location:1268
    DUF5578; Family of unknown function (DUF5578)
  9. XM_011541345.1XP_011539647.1  armadillo-like helical domain containing protein 1 isoform X2

    Conserved Domains (1) summary
    pfam17741
    Location:1255
    DUF5578; Family of unknown function (DUF5578)
  10. XM_006710604.2XP_006710667.1  armadillo-like helical domain containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_006710667.1

    Conserved Domains (1) summary
    pfam17741
    Location:1268
    DUF5578; Family of unknown function (DUF5578)
  11. XM_011541343.1XP_011539645.1  armadillo-like helical domain containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011539645.1

    Conserved Domains (1) summary
    pfam17741
    Location:1268
    DUF5578; Family of unknown function (DUF5578)
  12. XM_011541341.1XP_011539643.1  armadillo-like helical domain containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011539643.1

    Conserved Domains (1) summary
    pfam17741
    Location:1268
    DUF5578; Family of unknown function (DUF5578)
  13. XM_017001142.1XP_016856631.1  armadillo-like helical domain containing protein 1 isoform X4

    Conserved Domains (1) summary
    pfam17741
    Location:1268
    DUF5578; Family of unknown function (DUF5578)
  14. XM_017001143.1XP_016856632.1  armadillo-like helical domain containing protein 1 isoform X6

    Conserved Domains (1) summary
    pfam17741
    Location:1268
    DUF5578; Family of unknown function (DUF5578)

RNA

  1. XR_001737142.1 RNA Sequence

  2. XR_001737143.1 RNA Sequence

  3. XR_001737139.1 RNA Sequence

  4. XR_001737146.1 RNA Sequence

  5. XR_001737140.1 RNA Sequence

    Related
    ENST00000357508.5
  6. XR_001737141.1 RNA Sequence

  7. XR_001737144.1 RNA Sequence

  8. XR_001737147.1 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001004307.2: Suppressed sequence

    Description
    NM_001004307.2: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.
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