U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINC00667 long intergenic non-protein coding RNA 667 [ Homo sapiens (human) ]

Gene ID: 339290, updated on 3-Jul-2022

Summary

Official Symbol
LINC00667provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 667provided by HGNC
Primary source
HGNC:HGNC:27906
See related
Ensembl:ENSG00000263753 AllianceGenome:HGNC:27906
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in duodenum (RPKM 11.0), fat (RPKM 10.5) and 25 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LINC00667 in Genome Data Viewer
Location:
18p11.31
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (5238100..5246508)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (5400345..5408774)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (5238099..5246507)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904341 Neighboring gene transforming acidic coiled-coil containing protein 3 pseudogene Neighboring gene long intergenic non-protein coding RNA 526 Neighboring gene zinc finger and BTB domain containing 14 Neighboring gene uncharacterized LOC107985144

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Clone Names

  • FLJ32367, DKFZp686I1198

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015389.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP001496
    Related
    ENST00000582008.6

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    5238100..5246508
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    5400345..5408774
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)