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LINC02693 long intergenic non-protein coding RNA 2693 [ Homo sapiens (human) ]

Gene ID: 339263, updated on 13-Mar-2020

Summary

Official Symbol
LINC02693provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2693provided by HGNC
Primary source
HGNC:HGNC:27904
See related
Ensembl:ENSG00000212719
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C17orf51
Expression
Broad expression in brain (RPKM 7.0), testis (RPKM 3.7) and 24 other tissues See more
Orthologs

Genomic context

See LINC02693 in Genome Data Viewer
Location:
17p11.2
Exon count:
2
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (21528310..21551678, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (21343211..21454941, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene PDZ and LIM domain 1 pseudogene 2 Neighboring gene uncharacterized LOC105371589 Neighboring gene ribosomal protein L21 pseudogene 120 Neighboring gene fermitin family member 3 pseudogene Neighboring gene uncharacterized LOC101930665

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ12977, FLJ31874, FLJ33618, FLJ38937, FLJ41148

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_160801.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC233702, BC010612
    Related
    ENST00000647872.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    21528310..21551678 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001113434.4: Suppressed sequence

    Description
    NM_001113434.4: This RefSeq was removed because it is now thought that this gene does not encode a protein.
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