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Hsp60C Heat shock protein 60C [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33796, updated on 12-Aug-2018

Summary

Official Symbol
Hsp60Cprovided by FlyBase
Official Full Name
Heat shock protein 60Cprovided by FlyBase
Primary source
FLYBASE:FBgn0031728
Locus tag
Dmel_CG7235
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster (old-lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
A4V087_DROME; bs36d10.y1; CG7235; Dm25E; Dmel\CG7235; HSP60C; Hsp64

Genomic context

See Hsp60C in Genome Data Viewer
Location:
25F2-25F2; 2-17 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.13 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (5662849..5670838)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (5662849..5670838)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Dpr-interacting protein theta Neighboring gene mir-964 stem loop Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

Bibliography

Pathways from BioSystems

  • RNA degradation, organism-specific biosystem (from KEGG)
    RNA degradation, organism-specific biosystemThe correct processing, quality control and turnover of cellular RNA molecules are critical to many aspects in the expression of genetic information. In eukaryotes, two major pathways of mRNA decay e...
  • RNA degradation, conserved biosystem (from KEGG)
    RNA degradation, conserved biosystemThe correct processing, quality control and turnover of cellular RNA molecules are critical to many aspects in the expression of genetic information. In eukaryotes, two major pathways of mRNA decay e...

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
unfolded protein binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
'de novo' protein folding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
'de novo' protein folding ISS
Inferred from Sequence or Structural Similarity
more info
 
apoptotic mitochondrial changes IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
female germline ring canal formation IMP
Inferred from Mutant Phenotype
more info
PubMed 
mitochondrion organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
oogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
open tracheal system development IMP
Inferred from Mutant Phenotype
more info
PubMed 
ovarian follicle cell development IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein import into mitochondrial intermembrane space IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein refolding IEA
Inferred from Electronic Annotation
more info
 
protein targeting to mitochondrion ISS
Inferred from Sequence or Structural Similarity
more info
 
spermatogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mitochondrial matrix ISS
Inferred from Sequence or Structural Similarity
more info
 
mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
heat shock protein 60C
Names
CG7235-PA
CG7235-PB
CG7235-PC
Hsp60C-PA
Hsp60C-PB
Hsp60C-PC

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    5662849..5670838
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_164654.2NP_723104.2  heat shock protein 60C, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_723104.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VMN5
    Related
    FBpp0078742.1, FBtr0079110
    Conserved Domains (2) summary
    PTZ00114
    Location:23553
    PTZ00114; Heat shock protein 60; Provisional
    cd03344
    Location:28548
    GroEL; GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found ...
  2. NM_135104.5NP_608948.2  heat shock protein 60C, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_608948.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VMN5
    Related
    FBpp0078743.1, FBtr0079111
    Conserved Domains (2) summary
    PTZ00114
    Location:23553
    PTZ00114; Heat shock protein 60; Provisional
    cd03344
    Location:28548
    GroEL; GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found ...
  3. NM_164655.3NP_723105.2  heat shock protein 60C, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_723105.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VMN5
    Related
    FBpp0078744.1, FBtr0079112
    Conserved Domains (2) summary
    PTZ00114
    Location:23553
    PTZ00114; Heat shock protein 60; Provisional
    cd03344
    Location:28548
    GroEL; GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found ...
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